RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 CCDC71LQ8N9Z2 235 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 COQ8AQ8NI60 647 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-202ENST00000375271 SCRT1Q9BWW7 348 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
PTCH1-202ENST00000375271 GOLT1BQ9Y3E0 138 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 H3BMM0 161 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 CD74P04233 296 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 OR10J1P30954 320 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 ID1P41134 155 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 RND2P52198 227 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 PIGPP57054 158 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 ETFRF1Q6IPR1 90 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 SNX29P2Q8IUI4 249 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 NEU1Q99519 415 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 YTHDF1Q9BYJ9 559 aaKnown RBP10.11□□□□□ -0.79
PTCH1-202ENST00000375271 FNDC4Q9H6D8 234 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-202ENST00000375271 SCPEP1Q9HB40 452 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 HEYLQ9NQ87 328 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-202ENST00000375271 COPZ2Q9P299 210 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
PTCH1-202ENST00000375271 HBE1P02100 147 aa10.1□□□□□ -0.79
PTCH1-202ENST00000375271 FXYD7P58549 80 aa10.1□□□□□ -0.79
PTCH1-202ENST00000375271 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
PTCH1-202ENST00000375271 LYSMD2Q8IV50 215 aa10.1□□□□□ -0.79
PTCH1-202ENST00000375271 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
PTCH1-202ENST00000375271 A0A0B4J293 547 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 IGKV1-17P01599 117 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 IGKV1-5P01602 117 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 PI3P19957 117 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 NKX2-1P43699 371 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-202ENST00000375271 SPCS3P61009 180 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 YPEL3P61236 119 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-202ENST00000375271 RND3P61587 244 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 DAD1P61803 113 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 DHODHQ02127 395 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 MLANAQ16655 118 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 RNASE10Q5GAN6 216 aaKnown RBP10.09□□□□□ -0.79
PTCH1-202ENST00000375271 GSG1LQ6UXU4 331 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-202ENST00000375271 Q6ZR54 194 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 NOXA1Q86UR1 476 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 MAPKAPK5-AS1Q8N8E1 139 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 GPX8Q8TED1 209 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 TMEM208Q9BTX3 173 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
PTCH1-202ENST00000375271 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
PTCH1-202ENST00000375271 LOC102723971A0A1B0GUV8 181 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 CEBPZOSA8MTT3 80 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 M0QYG6 137 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 FAM3BP58499 235 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-202ENST00000375271 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 SLC24A4Q8NFF2 622 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
PTCH1-202ENST00000375271 ACY3Q96HD9 319 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 TP53RKQ96S44 253 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 PBDC1Q9BVG4 233 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 MAGT1Q9H0U3 335 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 COMMD3Q9UBI1 195 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
PTCH1-202ENST00000375271 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-202ENST00000375271 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 IGLC1P0CG04 106 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 ZNF705DP0CH99 300 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-202ENST00000375271 ZNF705BP0CI00 300 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-202ENST00000375271 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 FAM219AQ8IW50 185 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 PPP1R14BQ96C90 147 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-202ENST00000375271 U3KQE9 123 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
PTCH1-202ENST00000375271 TOMM40O96008 361 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
PTCH1-202ENST00000375271 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-202ENST00000375271 SP6Q3SY56 376 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 SCGB2B2Q4G0G5 96 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
PTCH1-202ENST00000375271 SPATA31B1PQ5VZV4 182 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 PRSS54Q6PEW0 395 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 ARRDC1Q8N5I2 433 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
PTCH1-202ENST00000375271 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
PTCH1-202ENST00000375271 FAM25AB3EWG3 89 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 FAM25CB3EWG5 89 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 FAM25GB3EWG6 89 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 BUB3O43684 328 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
PTCH1-202ENST00000375271 APOA1P02647 267 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms