RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TCF24Q7RTU0 167 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 C16orf82Q7Z2V1 217 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
UBR4-202ENST00000375224 NPVFQ9HCQ7 196 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 KBTBD11O94819 623 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 CCL3L1P16619 93 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 OPRK1P41145 380 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 TMEM249Q2WGJ8 235 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 ZNF672Q499Z4 452 aaPredicted RBP6.69□□□□□ -1.34
UBR4-202ENST00000375224 LYPD2Q6UXB3 125 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 OR9G1Q8NH87 305 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 PLEKHA3Q9HB20 300 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 PEF1Q9UBV8 284 aaKnown RBP6.69□□□□□ -1.34
UBR4-202ENST00000375224 MGAQ8IWI9 3026 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 OR2T8A6NH00 312 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 J3QR06 171 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 LOXP28300 417 aaPredicted RBP6.69□□□□□ -1.34
UBR4-202ENST00000375224 PPOXP50336 477 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 PRCDQ00LT1 54 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 TMEM155Q4W5P6 130 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 PDPNQ86YL7 162 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 OR5AN1Q8NGI8 311 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 OR4A5Q8NH83 315 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 VSTM2AQ8TAG5 236 aa6.69□□□□□ -1.34
UBR4-202ENST00000375224 RRHO14718 337 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 CDKN1AP38936 164 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 RPS16P62249 146 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 ACTL10Q5JWF8 245 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 Q6ZWC4 215 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 ABHD12Q8N2K0 398 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 RAB1CQ92928 201 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 FLYWCH2Q96CP2 140 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 CHRDL1Q9BU40 450 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 MRPL27Q9P0M9 148 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 POLEQ07864 2286 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 DSPP15924 2871 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 LAMA5O15230 3695 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 TRBV7-9A0A0J9YWB2 115 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 PRSS46E5RG02 174 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 IGKV1D-33P01593 117 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 IGKV1-33P01594 117 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 ZNF137PP52743 207 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 OR4C13Q8NGP0 309 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 MRPL20Q9BYC9 149 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 SLC25A22Q9H936 323 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 PGPEP1Q9NXJ5 209 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 CTSZQ9UBR2 303 aa6.68□□□□□ -1.34
UBR4-202ENST00000375224 RALYQ9UKM9 306 aaKnown RBP6.68□□□□□ -1.34
UBR4-202ENST00000375224 A0A1W2PPV4 95 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 H0YJW9 148 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 PLAUP00749 431 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 PPIAL4GP0DN37 164 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 USF1P22415 310 aaPredicted RBP6.67□□□□□ -1.34
UBR4-202ENST00000375224 DLX6P56179 175 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 ADORA2A-AS1P86434 159 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 HARBI1Q96MB7 349 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 SMIM7Q9BQ49 75 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 RAB1BQ9H0U4 201 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 THYN1Q9P016 225 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 ARFGEF3Q5TH69 2177 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 PIEZO2Q9H5I5 2752 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 TMEM250H0YL14 139 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 MEF2BQ02080 365 aaPredicted RBP6.67□□□□□ -1.34
UBR4-202ENST00000375224 CCDC144NLQ6NUI1 221 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 TMEM204Q9BSN7 226 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 SDF2L1Q9HCN8 221 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 TET2Q6N021 2002 aaPredicted RBP6.67□□□□□ -1.34
UBR4-202ENST00000375224 DLL1O00548 723 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 RBP4P02753 201 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
UBR4-202ENST00000375224 SAA1P0DJI8 122 aaPredicted RBP6.67□□□□□ -1.34
UBR4-202ENST00000375224 IGHV1-8P0DP01 117 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 COMMD5Q9GZQ3 224 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 TMEM133Q9H2Q1 129 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 CEP295Q9C0D2 2601 aa6.67□□□□□ -1.34
UBR4-202ENST00000375224 CFAP47Q6ZTR5 3102 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 TLN1Q9Y490 2541 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 TEX50A0A1B0GTY4 177 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 FCN3O75636 299 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 CA2P00918 260 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 ERHP84090 104 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 PSG9Q00887 426 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 C2orf83Q53S99 150 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 FAM90A2PQ658T7 463 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 OR1L8Q8NGR8 309 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 NABP2Q9BQ15 211 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 INS-IGF2F8WCM5 200 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 CRISP2P16562 243 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 RPL8P62917 257 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 OR51G1Q8NGK1 321 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 TMEM167AQ8TBQ9 72 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 ST6GALNAC6Q969X2 333 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 BORCS7Q96B45 105 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms