RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 A0A0G2JLM5 398 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 TCRBV4S1A1TA0A5B7 111 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 C17orf112F2Z3M2 114 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 OR10J1P30954 320 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 RPL29P47914 159 aaKnown RBP13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 SERF2P84101 59 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 PRR20EP86478 221 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 PRR20CP86479 221 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 PRR20DP86480 221 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 PRR20BP86481 221 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 PRR20AP86496 221 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 C10orf99Q6UWK7 81 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZNF709Q8N972 641 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 LINC01006Q8NI28 216 aa13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 GAR1Q9NY12 217 aaKnown RBP13.37□□□□□ -0.27
HLA-DMA-201ENST00000374843 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 IGKV1-17P01599 117 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 SELENOTP62341 195 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 KIAA0141Q14154 515 aaPredicted RBP13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 ALKAL2Q6UX46 152 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 CYP2G1PQ6ZSU1 146 aa13.36□□□□□ -0.27
HLA-DMA-201ENST00000374843 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 STPG3Q8N7X2 389 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 UBQLN2Q9UHD9 624 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 RFNGQ9Y644 331 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 PXMP4Q9Y6I8 212 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 S4R3C0 116 aa13.35□□□□□ -0.27
HLA-DMA-201ENST00000374843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 GNG7O60262 68 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 SCGB2A1O75556 95 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 FABP1P07148 127 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 LINC00869P0C866 280 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 SULT1A2P50226 295 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 YPEL3P61236 119 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 Q56UQ5 140 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
HLA-DMA-201ENST00000374843 TSPAN15O95858 294 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 IGHV3-23P01764 117 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 GPR183P32249 361 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 RAB5CP51148 216 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 B2MP61769 119 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 ZNF90Q03938 601 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 TIGITQ495A1 244 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 SPSB3Q6PJ21 355 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 TMEM182Q6ZP80 229 aaPredicted RBP13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 LCNL1Q6ZST4 164 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 ZNF414Q96IQ9 312 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 NIPBLQ6KC79 2804 aaeCLIP13.33□□□□□ -0.28
HLA-DMA-201ENST00000374843 CLPSL1A2RUU4 121 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 TGOLN2O43493 480 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 YIF1AO95070 293 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 TOMM40O96008 361 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 MBP02144 154 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 CTSGP08311 255 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 ADMP35318 185 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 PROK1P58294 105 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 TCTEX1D4Q5JR98 221 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 FFAR4Q5NUL3 377 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 FAM74A1Q5RGS3 127 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 DPPA3Q6W0C5 159 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 OR5AU1Q8NGC0 362 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 OR4X2Q8NGF9 303 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 WFDC12Q8WWY7 111 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 UBE2E2Q96LR5 201 aa13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 TEP1Q99973 2627 aaKnown RBP13.32□□□□□ -0.28
HLA-DMA-201ENST00000374843 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 NUPL2O15504 423 aaKnown RBP13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 ELLP55199 621 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 PLP1P60201 277 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 TMEM41BQ5BJD5 291 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 AKR1C8PQ5T2L2 129 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 PXDC1Q5TGL8 231 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 CLEC19AQ6UXS0 136 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 RNF141Q8WVD5 230 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
HLA-DMA-201ENST00000374843 C2CD3Q4AC94 2353 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 OR2C1O95371 312 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 CLEC3BP05452 202 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 LGALS1P09382 135 aaKnown RBP13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 PSG1P11464 419 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 M6PRP20645 277 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 ZNF616Q08AN1 781 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 ACOT6Q3I5F7 207 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 GNB4Q9HAV0 340 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 RNF114Q9Y508 228 aa13.3□□□□□ -0.28
HLA-DMA-201ENST00000374843 SEC14L6B5MCN3 397 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 IGHV3-11P01762 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms