RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PLGLAQ15195 96 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 C11orf42Q8N5U0 333 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 TMEM167AQ8TBQ9 72 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 TMEM186Q96B77 213 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 FAM167A-AS1Q96KT0 104 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 TXNDC17Q9BRA2 123 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 CD3EP07766 207 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 MFAP2P55001 183 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 VMA21Q3ZAQ7 101 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 HILPDAQ9Y5L2 63 aa13.72□□□□□ -0.21
RXRB-201ENST00000374680 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 ONECUT1Q9UBC0 465 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 TP53TG3Q9ULZ0 132 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 CELSR1Q9NYQ6 3014 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 C22orf46C9J442 243 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 TMEM155Q4W5P6 130 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 COA6Q5JTJ3 125 aaKnown RBP13.71□□□□□ -0.21
RXRB-201ENST00000374680 IBA57Q5T440 356 aaKnown RBP13.71□□□□□ -0.21
RXRB-201ENST00000374680 BTF3L4Q96K17 158 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 TMEM133Q9H2Q1 129 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 TNFRSF19Q9NS68 423 aa13.71□□□□□ -0.21
RXRB-201ENST00000374680 AMMECR1Q9Y4X0 333 aaPredicted RBP13.71□□□□□ -0.21
RXRB-201ENST00000374680 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 PDPNQ86YL7 162 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 NGBQ9NPG2 151 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 ISLRO14498 428 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 APOBEC3AP31941 199 aaPredicted RBP13.7□□□□□ -0.22
RXRB-201ENST00000374680 ARF6P62330 175 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 SSX2Q16385 188 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 MUC15Q8N387 334 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 VSTM2AQ8TAG5 236 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 C11orf52Q96A22 123 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 SAMD10Q9BYL1 202 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 A0A1W2PN81 502 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
RXRB-201ENST00000374680 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 RNF224P0DH78 156 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 PDLIM4P50479 330 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 SUB1P53999 127 aaKnown RBP eCLIP13.69□□□□□ -0.22
RXRB-201ENST00000374680 PNKDQ8N490 385 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 CORTO00230 105 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 DLX6P56179 175 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 JKAMPQ9P055 326 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 HIVEP3Q5T1R4 2406 aa13.69□□□□□ -0.22
RXRB-201ENST00000374680 PGPA6NDG6 321 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 CCL21O00585 134 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 TNFRSF13BO14836 293 aaPredicted RBP13.68□□□□□ -0.22
RXRB-201ENST00000374680 RPL27AP46776 148 aaKnown RBP13.68□□□□□ -0.22
RXRB-201ENST00000374680 CACNG8Q8WXS5 425 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 PPIAL4CA0A0B4J2A2 164 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 TCRBV4S1A1TA0A5B7 111 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 C9JCJ5 164 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 SIAH2O43255 324 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 PPIAL4GP0DN37 164 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 CAMPP49913 170 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 LINC00310P59036 64 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 SSTP61278 116 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 KLF17Q5JT82 389 aaPredicted RBP13.68□□□□□ -0.22
RXRB-201ENST00000374680 TOMM20LQ6UXN7 152 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 TBX15Q96SF7 602 aa13.68□□□□□ -0.22
RXRB-201ENST00000374680 SLC25A5P05141 298 aaKnown RBP13.67□□□□□ -0.22
RXRB-201ENST00000374680 PMCHP20382 165 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 CDKN1AP38936 164 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 NBL1P41271 181 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 RBPJQ06330 500 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 MRGPRG-AS1Q2M3A8 158 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
RXRB-201ENST00000374680 RPEQ96AT9 228 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 CNIH1O95406 144 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 GPR6P46095 362 aaPredicted RBP13.67□□□□□ -0.22
RXRB-201ENST00000374680 DNLZQ5SXM8 178 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 OR5R1Q8NH85 324 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 RBP4P02753 201 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 YPEL3P61236 119 aaPredicted RBP13.67□□□□□ -0.22
RXRB-201ENST00000374680 LYZP61626 148 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 KLRD1Q13241 179 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 FAM19A2Q8N3H0 131 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 SSBP4Q9BWG4 385 aaPredicted RBP13.67□□□□□ -0.22
RXRB-201ENST00000374680 GNB4Q9HAV0 340 aa13.67□□□□□ -0.22
RXRB-201ENST00000374680 GCGP01275 180 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 Q6ZWC4 215 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
RXRB-201ENST00000374680 ZNF835Q9Y2P0 537 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 IGHV1-3A0A0C4DH29 117 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 RCHY1Q96PM5 261 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 RAXQ9Y2V3 346 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
RXRB-201ENST00000374680 TRAV8-1A0A0A6YYK1 113 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 A8MWP6 167 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms