RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 CXorf1O96002 111 aa14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 IGHG3P01860 377 aa14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 OR10J4P0C629 311 aa14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 BHLHA15Q7RTS1 189 aaPredicted RBP14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 OR2T6Q8NHC8 308 aa14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 ZNF71Q9NQZ8 489 aaPredicted RBP14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
LDLRAP1-201ENST00000374338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 HIST1H1AQ02539 215 aaPredicted RBP14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 ZNF474Q6S9Z5 364 aaPredicted RBP14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 C11orf52Q96A22 123 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 OOEPA6NGQ2 149 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 SMAGPQ0VAQ4 97 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 H2BFWTQ7Z2G1 175 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 JMJD8Q96S16 334 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 SCRT2Q9NQ03 307 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 WDR83OSQ9Y284 106 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 ZNF835Q9Y2P0 537 aa14.13□□□□□ -0.15
LDLRAP1-201ENST00000374338 PRR33A8MZF0 331 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 PIP4P1Q86T03 277 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 ATP6V0BQ99437 205 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 SSBP3Q9BWW4 388 aaPredicted RBP14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 COL6A6A6NMZ7 2263 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 HLA-DRB1P01911 266 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 PDLIM3Q53GG5 364 aaPredicted RBP14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 CENPWQ5EE01 88 aa14.12□□□□□ -0.15
LDLRAP1-201ENST00000374338 CRXO43186 299 aaPredicted RBP14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 FOXE3Q13461 319 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 GUSBP1Q15486 140 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 PSG3Q16557 428 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 CFAP161Q6P656 301 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 PQLC2Q6ZP29 291 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 MOB1BQ7L9L4 216 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 ABHD12Q8N2K0 398 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 MCRIP2Q9BUT9 160 aaKnown RBP14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 HINT2Q9BX68 163 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 OSTCQ9NRP0 149 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 AKAP6Q13023 2319 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 GPR183P32249 361 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 GCSAMQ8N6F7 178 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 ITLN1Q8WWA0 313 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 MGST2Q99735 147 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 MS4A5Q9H3V2 200 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 SPTBN4Q9H254 2564 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 SH2D7A6NKC9 451 aaPredicted RBP14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 GNG4P50150 75 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 RPL8P62917 257 aaKnown RBP14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 TREML4Q6UXN2 200 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 OR4A5Q8NH83 315 aa14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 ZNF331Q9NQX6 463 aaPredicted RBP14.11□□□□□ -0.15
LDLRAP1-201ENST00000374338 DYSFO75923 2080 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 SMIM27A0A1W2PRY6 76 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 K7EP34 96 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 GCHFRP30047 84 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 PRB3Q04118 309 aaPredicted RBP14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 LINC00173Q6ZV60 143 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 KLK10O43240 276 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 GPR12P47775 334 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 REG1BP48304 166 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 KLF5Q13887 457 aaPredicted RBP14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 FAM120AOSQ5T036 256 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 Q8TCH9 128 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 SIGMAR1Q99720 223 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 C1RLQ9NZP8 487 aa14.1□□□□□ -0.15
LDLRAP1-201ENST00000374338 NPIPB11E5RHQ5 1161 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 SYS1-DBNDD2H3BUS1 97 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 MGST1P10620 155 aaKnown RBP14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 CD24P25063 80 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 PLP1P60201 277 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 SLC35E4Q6ICL7 350 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 FAM168AQ92567 244 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 AP1S3Q96PC3 154 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 NAA38Q9BRA0 125 aaKnown RBP14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 CHD8Q9HCK8 2581 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 HELTA6NFD8 242 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 NPFFR1Q9GZQ6 430 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 PLSCR4Q9NRQ2 329 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 FAM215AQ9Y5M1 114 aa14.09□□□□□ -0.15
LDLRAP1-201ENST00000374338 IZUMO1RA6ND01 250 aa14.08□□□□□ -0.15
LDLRAP1-201ENST00000374338 PPOXP50336 477 aa14.08□□□□□ -0.15
LDLRAP1-201ENST00000374338 URB1-AS1Q96HZ7 61 aa14.08□□□□□ -0.15
LDLRAP1-201ENST00000374338 SSBP4Q9BWG4 385 aaPredicted RBP14.08□□□□□ -0.15
LDLRAP1-201ENST00000374338 SAP30LQ9HAJ7 183 aa14.08□□□□□ -0.15
LDLRAP1-201ENST00000374338 H3BUT2 72 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 P0C879 139 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 SMIM17P0DL12 118 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 RAB9AP51151 201 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 CCL8P80075 99 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 GDF5OSQ5U4N7 250 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 GGTLC1Q9BX51 225 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 GCM1Q9NP62 436 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 SLC25A15Q9Y619 301 aa14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 SPTAN1Q13813 2472 aaKnown RBP14.08□□□□□ -0.16
LDLRAP1-201ENST00000374338 C15orf65H3BRN8 121 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms