RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 IGHV7-81A0A0B4J1V7 117 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 NPFFO15130 113 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 GATA2P23769 480 aaPredicted RBP9.91□□□□□ -0.82
PRPF4-202ENST00000374199 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 MRPL27Q9P0M9 148 aaKnown RBP9.91□□□□□ -0.82
PRPF4-202ENST00000374199 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 A0A1W2PRD5 423 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 A0A1W2PRF3 423 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 A0A1W2PRM7 423 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 SAA4P35542 130 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 OR51G1Q8NGK1 321 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 WNT10AQ9GZT5 417 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 SVEP1Q4LDE5 3571 aa9.91□□□□□ -0.82
PRPF4-202ENST00000374199 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 GP9P14770 177 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 WI2-2373I1.2A0A1W2PRP0 233 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 CX3CL1P78423 397 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 FXYD3Q14802 87 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 IGF2BP2-AS1Q96M15 143 aa9.9□□□□□ -0.82
PRPF4-202ENST00000374199 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.83
PRPF4-202ENST00000374199 CLDN34H7C241 214 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 PRB1P04280 392 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 CXCL1P09341 107 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 OR10J4P0C629 311 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 ZFP82Q8N141 532 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 ARPC1AQ92747 370 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 ACY3Q96HD9 319 aa9.9□□□□□ -0.83
PRPF4-202ENST00000374199 TRBV9A0A0B4J1U6 114 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 ACTL6BO94805 426 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 FAM106CPP0CH98 169 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 BPIFB3P59826 476 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 DERL1Q9BUN8 251 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 CELSR2Q9HCU4 2923 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 USP9XQ93008 2570 aaPredicted RBP9.89□□□□□ -0.83
PRPF4-202ENST00000374199 IGHV4-30-2A0A087WSY4 118 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 TYMSP04818 313 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
PRPF4-202ENST00000374199 FAM120AOSQ5T036 256 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 FAM24BQ8N5W8 94 aa9.89□□□□□ -0.83
PRPF4-202ENST00000374199 IGHV1-69DA0A0B4J2H0 117 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 MRPS12O15235 138 aaKnown RBP9.88□□□□□ -0.83
PRPF4-202ENST00000374199 IGHV1-69P01742 117 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 TMEM68Q96MH6 324 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 GGCTO75223 188 aaKnown RBP9.88□□□□□ -0.83
PRPF4-202ENST00000374199 NDUFB4O95168 129 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 TOMM40O96008 361 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 LGALS4P56470 323 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 SGMS2Q8NHU3 365 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 MISP3Q96FF7 219 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 ATP6V0BQ99437 205 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 TXN2Q99757 166 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 ZNF580Q9UK33 172 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 IGLV2-8P01709 118 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 C5orf56Q8N8D9 126 aa9.88□□□□□ -0.83
PRPF4-202ENST00000374199 RPUSD4Q96CM3 377 aaKnown RBP9.88□□□□□ -0.83
PRPF4-202ENST00000374199 C5orf52A6NGY3 159 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 AMY1AP04745 511 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 TMEM11P17152 192 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 GATA3P23771 443 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 FAM110DQ8TAY7 271 aaPredicted RBP9.87□□□□□ -0.83
PRPF4-202ENST00000374199 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 CSMD1Q96PZ7 3565 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 K7EN84 100 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 TGOLN2O43493 480 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 SRP14P37108 136 aaKnown RBP9.87□□□□□ -0.83
PRPF4-202ENST00000374199 UBE2G2P60604 165 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 PERPQ96FX8 193 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 RBM14Q96PK6 669 aaKnown RBP9.87□□□□□ -0.83
PRPF4-202ENST00000374199 C1RLQ9NZP8 487 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 CSMD2Q7Z408 3487 aa9.87□□□□□ -0.83
PRPF4-202ENST00000374199 TRAV5A0A0B4J249 113 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 SLC25A16P16260 332 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 CLEC2AQ6UVW9 174 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 C16orf82Q7Z2V1 217 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 C22orf15Q8WYQ4 148 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 PLXNB1O43157 2135 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 COX7A2P2O60397 106 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 BRS3P32247 399 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 FOXL1Q12952 345 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 SMIM12Q96EX1 92 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 HSPB9Q9BQS6 159 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 UBE2CO00762 179 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 FSHBP01225 129 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 CD24P25063 80 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 LRRC75A-AS1Q8N1F1 130 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 OR51M1Q9H341 326 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
PRPF4-202ENST00000374199 TRBV6-1A0A0K0K1D8 114 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms