RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ZNF98A6NK75 572 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 I3L2K1 104 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BKO60814 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 TOX4O94842 621 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 NDUFB8O95169 186 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 TOMM40O96008 361 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BJP06899 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 CXCL1P09341 107 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BOP23527 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 NPPCP23582 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BBP33778 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 AKR1D1P51857 326 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 MFAP4P55083 255 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BDP58876 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 UBE2G2P60604 165 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BCP62807 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 DIAPH2-AS1Q14236 149 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 FXYD3Q14802 87 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST2H2BEQ16778 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 TMEM183BQ1AE95 376 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 CT83Q5H943 113 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF343Q6P1L6 599 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 LINC00305Q7Z4B0 112 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 BPIFA4PQ86YQ2 179 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 C5orf17Q8NAS9 161 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 OR5AU1Q8NGC0 362 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 OR2T6Q8NHC8 308 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BHQ93079 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 FAM122AQ96E09 287 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 FMC1Q96HJ9 113 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 GPR82Q96P67 336 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BNQ99877 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST1H2BMQ99879 126 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 PIMREGQ9BSJ6 248 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 SLC25A2Q9BXI2 301 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 CLEC5AQ9NY25 188 aa6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 YTHDF2Q9Y5A9 579 aaKnown RBP6.95□□□□□ -1.3
SNRNP40-202ENST00000373720 SPTA1P02549 2419 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 LYNX1G3V0Z9 82 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 M0QZK8 103 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF253O75346 499 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 TRGC2P03986 189 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 NBEAP1P0C6P0 100 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 IGLC1P0CG04 106 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 RD3LP0DJH9 198 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 LYNX1P0DP58 116 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 COX7A1P24310 79 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 LY6DQ14210 128 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 RPEL1Q2QD12 228 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 ACTL10Q5JWF8 245 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 FAM162BQ5T6X4 162 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 TMEM183AQ8IXX5 376 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 SGMS2Q8NHU3 365 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 ARPC1AQ92747 370 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNRD1Q9P1U0 126 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 URGCP-MRPS24S4R325 110 aa6.94□□□□□ -1.3
SNRNP40-202ENST00000373720 YLPM1P49750 1951 aaKnown RBP6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 DOCK11Q5JSL3 2073 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 E7EUB6 86 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 PHOX2AO14813 284 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 MYCNOSP40205 109 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ERVFC1-1P60608 527 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 LMO4P61968 165 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 UBE2G1P62253 170 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 HCP5Q6MZN7 132 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 OR4F17Q8NGA8 305 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 FXYD5Q96DB9 178 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 C12orf57Q99622 126 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 GFRA4Q9GZZ7 299 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 FBXL15Q9H469 300 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 UBTD1Q9HAC8 227 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF580Q9UK33 172 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 EPDR1Q9UM22 224 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 MGAQ8IWI9 3026 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 CELSR3Q9NYQ7 3312 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 TET2Q6N021 2002 aaPredicted RBP6.93□□□□□ -1.3
SNRNP40-202ENST00000373720 ICE1Q9Y2F5 2266 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 IGLV11-55A0A075B6I3 123 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A1W2PPQ1 181 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 H3BUA1 57 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PEX7O00628 323 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms