RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 LY96Q9Y6Y9 160 aa16.4■□□□□ 0.22
SYNC-201ENST00000373484 ESDP10768 282 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 OR10J1P30954 320 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 BRWD1-AS2P59051 145 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 SELENOTP62341 195 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 GNB1P62873 340 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 PAFAH1B2P68402 229 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 SRSF2Q01130 221 aaKnown RBP16.39■□□□□ 0.21
SYNC-201ENST00000373484 TMEM30BQ3MIR4 351 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 OR9G1Q8NH87 305 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 ZNF596Q8TC21 504 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 GATAD1Q8WUU5 269 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 C5orf30Q96GV9 206 aa16.39■□□□□ 0.21
SYNC-201ENST00000373484 DNAJC9-AS1A6NH13 148 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 C15orf62A8K5M9 175 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 M0QZK8 103 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 CD1BP29016 333 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 USF2Q15853 346 aaPredicted RBP16.38■□□□□ 0.21
SYNC-201ENST00000373484 MINOS1Q5TGZ0 78 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 LEAP2Q969E1 77 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 MEGF9Q9H1U4 602 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 PSG11Q9UQ72 335 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 MINOS1-NBL1R4GNA1 71 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 ATRQ13535 2644 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 TCAPO15273 167 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 HOXA3O43365 443 aaPredicted RBP16.38■□□□□ 0.21
SYNC-201ENST00000373484 PRRX1P54821 245 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 HTD2P86397 168 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 ZNF816Q0VGE8 651 aaPredicted RBP16.38■□□□□ 0.21
SYNC-201ENST00000373484 HLA-DRB5Q30154 266 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 FAM78BQ5VT40 261 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 SFRP2Q96HF1 295 aa16.38■□□□□ 0.21
SYNC-201ENST00000373484 IGHV3-43A0A0B4J1X8 118 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 A0A1W2PPV4 95 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 ZNF320A2RRD8 509 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 J3QR06 171 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 HMGB3O15347 200 aaKnown RBP16.37■□□□□ 0.21
SYNC-201ENST00000373484 RBFOX2O43251 390 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYNC-201ENST00000373484 IGHV3-7P01780 117 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 IGHV3-43DP0DP04 118 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 HTR1DP28221 377 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 KRTAP21-3Q3LHN1 58 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 ARL2-SNX15V9GYD0 113 aa16.37■□□□□ 0.21
SYNC-201ENST00000373484 M0R143 59 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 CXorf1O96002 111 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 IER3P46695 156 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 FAM53AQ6NSI3 398 aaPredicted RBP16.36■□□□□ 0.21
SYNC-201ENST00000373484 DYNAPQ8N1N2 210 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 SSMEM1Q8WWF3 244 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 DUX5Q96PT3 197 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 NAGKQ9UJ70 344 aa16.36■□□□□ 0.21
SYNC-201ENST00000373484 STAG3L2P0CL84 134 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 STAG3L3P0CL85 134 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 CHRNA7P36544 502 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 GNG10P50151 68 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 TMEM86BQ8N661 226 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 C8orf31Q8N9H6 132 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 DPM3Q9P2X0 92 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 GNG12Q9UBI6 72 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 JPT1Q9UK76 154 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 FBN1P35555 2871 aaKnown RBP16.35■□□□□ 0.21
SYNC-201ENST00000373484 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 BUB1B-PAK6H3BSN5 160 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 TGIF2LXQ8IUE1 241 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 OR52L2PQ8NGH6 319 aa16.35■□□□□ 0.21
SYNC-201ENST00000373484 TRBV9A0A0B4J1U6 114 aa16.34■□□□□ 0.21
SYNC-201ENST00000373484 NDUFB4O95168 129 aa16.34■□□□□ 0.21
SYNC-201ENST00000373484 IGHV4-59P01825 116 aa16.34■□□□□ 0.21
SYNC-201ENST00000373484 LINC00311Q8N616 119 aa16.34■□□□□ 0.21
SYNC-201ENST00000373484 ZNF439Q8NDP4 499 aa16.34■□□□□ 0.21
SYNC-201ENST00000373484 HPRT1P00492 218 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 RAB4AP20338 218 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 MORN2Q502X0 79 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 SGMS2Q8NHU3 365 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 C11orf52Q96A22 123 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 MS4A10Q96PG2 267 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 C20orf144Q9BQM9 153 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 AMMECR1Q9Y4X0 333 aaPredicted RBP16.33■□□□□ 0.21
SYNC-201ENST00000373484 HILPDAQ9Y5L2 63 aa16.33■□□□□ 0.21
SYNC-201ENST00000373484 C9JCJ5 164 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 LY6LH3BQJ8 138 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 RNASE1P07998 156 aaKnown RBP16.33■□□□□ 0.2
SYNC-201ENST00000373484 CEACAM3P40198 252 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 KIR2DS2P43631 304 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 RANP62826 216 aaKnown RBP16.33■□□□□ 0.2
SYNC-201ENST00000373484 CST9LP1Q5W188 147 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 R3HDM4Q96D70 268 aa16.33■□□□□ 0.2
SYNC-201ENST00000373484 FNDC10F2Z333 226 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 YPEL1O60688 119 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 RBMXL2O75526 392 aaKnown RBP16.32■□□□□ 0.2
SYNC-201ENST00000373484 SCGB1D1O95968 90 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 MT-CO2P00403 227 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 SNRPCP09234 159 aaKnown RBP16.32■□□□□ 0.2
SYNC-201ENST00000373484 RPL19P84098 196 aaKnown RBP16.32■□□□□ 0.2
SYNC-201ENST00000373484 KRTAP24-1Q3LI83 254 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 SLC25A48Q6ZT89 311 aaKnown RBP16.32■□□□□ 0.2
SYNC-201ENST00000373484 OR10G8Q8NGN5 311 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 OR10X1Q8NGY0 326 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 YPEL2Q96QA6 119 aa16.32■□□□□ 0.2
SYNC-201ENST00000373484 PRSS46E5RG02 174 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms