RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DEPPQ9NTK1 212 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 C1QTNF9P0C862 333 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 GZMBP10144 247 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 RHOGP84095 191 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 ZIC4Q8N9L1 334 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 C9orf172C9J069 976 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 GATA2P23769 480 aaPredicted RBP11.83□□□□□ -0.52
LMX1B-202ENST00000373474 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 FGFBP3Q8TAT2 258 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 FAM57AQ8TBR7 257 aa11.83□□□□□ -0.52
LMX1B-202ENST00000373474 SPINK8P0C7L1 97 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 TDGF1P13385 188 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 PRTN3P24158 256 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 FAM166AQ6J272 317 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 RNASE7Q9H1E1 156 aaKnown RBP11.82□□□□□ -0.52
LMX1B-202ENST00000373474 TRAV8-1A0A0A6YYK1 113 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 VSIRQ9H7M9 311 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 PDLIM4P50479 330 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 MORN3Q6PF18 240 aaPredicted RBP11.82□□□□□ -0.52
LMX1B-202ENST00000373474 LINC01560Q8TB33 94 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 RSPO3Q9BXY4 272 aaPredicted RBP11.82□□□□□ -0.52
LMX1B-202ENST00000373474 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 DPM3Q9P2X0 92 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 EPDR1Q9UM22 224 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 CEACAM1P13688 526 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 HIST1H4AP62805 103 aaKnown RBP11.82□□□□□ -0.52
LMX1B-202ENST00000373474 TSKUQ8WUA8 353 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 SBF1O95248 1867 aa11.82□□□□□ -0.52
LMX1B-202ENST00000373474 PINLYPA6NC86 204 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 LY6EQ16553 131 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 FOXL1Q12952 345 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 CD69Q07108 199 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 PNRC2Q9NPJ4 139 aaKnown RBP11.81□□□□□ -0.52
LMX1B-202ENST00000373474 FOXH1O75593 365 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 PRDM6Q9NQX0 595 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 IGKV1-27A0A075B6S5 117 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 CFHR1Q03591 330 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 TMEM86BQ8N661 226 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 ARPC1AQ92747 370 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 FBXL7Q9UJT9 491 aa11.81□□□□□ -0.52
LMX1B-202ENST00000373474 CD5LO43866 347 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
LMX1B-202ENST00000373474 C17orf100A8MU93 164 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 QRFPP83859 136 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 ZFP36L1Q07352 338 aaKnown RBP11.8□□□□□ -0.52
LMX1B-202ENST00000373474 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 F2Z2F3 143 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 CRPP02741 224 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
LMX1B-202ENST00000373474 DUTP33316 252 aaKnown RBP11.79□□□□□ -0.52
LMX1B-202ENST00000373474 GNG5P63218 68 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 GGNQ86UU5 652 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 KNL1Q8NG31 2342 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 CT83Q5H943 113 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 COX11Q9Y6N1 276 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 S4R3C0 116 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 TRPM7Q96QT4 1865 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 TOMM40O96008 361 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 PLEKHB2Q96CS7 222 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 SPRR3Q9UBC9 169 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 TCRBV4S1A1TA0A5B7 111 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 COX6B1P14854 86 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 EFNB3Q15768 340 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 CSRP2Q16527 193 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 TFF1P04155 84 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 CXCL1P09341 107 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 PPP1R27Q86WC6 154 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 NEU4Q8WWR8 484 aaPredicted RBP11.79□□□□□ -0.52
LMX1B-202ENST00000373474 MESP1Q9BRJ9 268 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 WDR83OSQ9Y284 106 aa11.79□□□□□ -0.52
LMX1B-202ENST00000373474 RLFQ13129 1914 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 NAPSAO96009 420 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 TRGV3P03979 118 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 ASCC3Q8N3C0 2202 aaKnown RBP11.78□□□□□ -0.52
LMX1B-202ENST00000373474 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 LYL1P12980 280 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 SPANXCQ9NY87 97 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 TMEM42Q69YG0 159 aa11.78□□□□□ -0.52
LMX1B-202ENST00000373474 SCN5AQ14524 2016 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms