RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SIVA1O15304 175 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 PRR20EP86478 221 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 PRR20CP86479 221 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 PRR20DP86480 221 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 PRR20BP86481 221 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 PRR20AP86496 221 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 RTL8BQ17RB0 113 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 CACNG8Q8WXS5 425 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 FAM110AQ9BQ89 295 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 HSPB8Q9UJY1 196 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 TRBV7-9A0A0J9YWB2 115 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 FOXC1Q12948 553 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 OR9G4Q8NGQ1 327 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 GPR82Q96P67 336 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
SF3A3-201ENST00000373019 ATRXP46100 2492 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 IGLV3-32A0A0A0MS00 114 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 A0A1W2PRD5 423 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 A0A1W2PRF3 423 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 A0A1W2PRM7 423 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 NKX2-8O15522 239 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 FXYD2P54710 66 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 GFERP55789 205 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 TM4SF20Q53R12 229 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 ABHD12Q8N2K0 398 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF808Q8N4W9 903 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-201ENST00000373019 SIGLEC8Q9NYZ4 499 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 B4GALT7Q9UBV7 327 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 SLC25A10Q9UBX3 287 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-201ENST00000373019 HCFC1P51610 2035 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 LINC00473A8K010 186 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 NPIPA3F8WFD2 350 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 B4GALT1P15291 398 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 CCNOP22674 350 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 VDAC2P45880 294 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-201ENST00000373019 CYB561P49447 251 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 CEBPDP49716 269 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-201ENST00000373019 NXPH1P58417 271 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 PPP1R32Q7Z5V6 425 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 PCP2Q8IVA1 136 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 MKXQ8IYA7 352 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 OR4X2Q8NGF9 303 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 GCM1Q9NP62 436 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 PTPRBP23467 1997 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 SPTY2D1-AS1A0A0U1RR47 76 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 K7ERJ3 54 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF292O60281 2723 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 HBBP68871 147 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 FHL3Q13643 280 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 FREM2Q5SZK8 3169 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 ZNF497Q6ZNH5 498 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 ADTRPQ96IZ2 230 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 TMEM167BQ9NRX6 74 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 PRO0461Q9UI25 63 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 TRAPPC2LQ9UL33 140 aa7.79□□□□□ -1.16
SF3A3-201ENST00000373019 C5orf49A4QMS7 147 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 MT-ATP8P03928 68 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 Q6P435 159 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 GALMQ96C23 342 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 OR2H1Q9GZK4 316 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 TIMM8BQ9Y5J9 83 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-201ENST00000373019 MYO18BQ8IUG5 2567 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 A0A1B0GX78 115 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 H3BMG7 143 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 MT-CO3P00414 261 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 ANKRD37Q7Z713 158 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 LINC00596Q86U02 117 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 TTC9CQ8N5M4 171 aa7.78□□□□□ -1.16
SF3A3-201ENST00000373019 C16orf97H3BN30 126 aa7.77□□□□□ -1.16
SF3A3-201ENST00000373019 MBNL3Q9NUK0 354 aaKnown RBP7.77□□□□□ -1.16
SF3A3-201ENST00000373019 ADAMTS20P59510 1910 aa7.77□□□□□ -1.16
SF3A3-201ENST00000373019 FASNP49327 2511 aaKnown RBP7.77□□□□□ -1.17
SF3A3-201ENST00000373019 TNRC6BQ9UPQ9 1833 aaKnown RBP7.77□□□□□ -1.17
SF3A3-201ENST00000373019 E9PLD3 99 aa7.77□□□□□ -1.17
SF3A3-201ENST00000373019 TMEM164Q5U3C3 297 aa7.77□□□□□ -1.17
SF3A3-201ENST00000373019 SVILO95425 2214 aa7.77□□□□□ -1.17
SF3A3-201ENST00000373019 A0A096LNJ9 63 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 B9A039 149 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 PF4V1P10720 104 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 TAS2R45P59539 299 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 ZBTB34Q8NCN2 500 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 METTL7AQ9H8H3 244 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 A8MWL6 223 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 XGP55808 180 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 GAGE5Q13069 117 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 GAGE6Q13070 117 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 LINC00322Q6ZN03 302 aaPredicted RBP7.76□□□□□ -1.17
SF3A3-201ENST00000373019 NFAM1Q8NET5 270 aaPredicted RBP7.76□□□□□ -1.17
SF3A3-201ENST00000373019 HINT2Q9BX68 163 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 TM2D2Q9BX73 214 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 TANC2Q9HCD6 1990 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 B5MCH6 92 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 ZADH2Q8N4Q0 377 aa7.76□□□□□ -1.17
SF3A3-201ENST00000373019 HSD17B10Q99714 261 aaKnown RBP7.76□□□□□ -1.17
SF3A3-201ENST00000373019 NABP2Q9BQ15 211 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 1478.1 ms