RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 F2RL2O00254 374 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 ZNF207O43670 478 aaKnown RBP11.15□□□□□ -0.62
USP49-201ENST00000373006 KIR2DS2P43631 304 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
USP49-201ENST00000373006 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
USP49-201ENST00000373006 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 RND1Q92730 232 aa11.15□□□□□ -0.62
USP49-201ENST00000373006 SRRM5B3KS81 715 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 PLAUP00749 431 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 MSMPQ1L6U9 139 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 C17orf58Q2M2W7 97 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 DEFB108BQ8NET1 73 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 OR4F17Q8NGA8 305 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 PRB4P10163 310 aaPredicted RBP11.14□□□□□ -0.63
USP49-201ENST00000373006 UBE2G1P62253 170 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 PSG9Q00887 426 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 MRPL27Q9P0M9 148 aaKnown RBP11.14□□□□□ -0.63
USP49-201ENST00000373006 ADGRG4Q8IZF6 3080 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 YLPM1P49750 1951 aaKnown RBP11.14□□□□□ -0.63
USP49-201ENST00000373006 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 TEX50A0A1B0GTY4 177 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 TOMM40O96008 361 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 GNG5P63218 68 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 TBR1Q16650 682 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 PPP1R35Q8TAP8 253 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
USP49-201ENST00000373006 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 OR8B3Q8NGG8 313 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 FAM167A-AS1Q96KT0 104 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 SPRY3O43610 288 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
USP49-201ENST00000373006 OR1N2Q8NGR9 330 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
USP49-201ENST00000373006 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 H0YJW9 148 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 TOX4O94842 621 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 SSX8Q7RTT4 187 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 SAP30LQ9HAJ7 183 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 PRNDQ9UKY0 176 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 COMMD5Q9GZQ3 224 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 ATMQ13315 3056 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 IGHV1-18A0A0C4DH31 117 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 UPK2O00526 184 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 PPBPP02775 128 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
USP49-201ENST00000373006 CCL11P51671 97 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 MBD6Q96DN6 1003 aa11.12□□□□□ -0.63
USP49-201ENST00000373006 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
USP49-201ENST00000373006 CR1LQ2VPA4 569 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 MUC15Q8N387 334 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 KBTBD11-OT1A0A1B0GTJ5 212 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 E7EUB6 86 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 SRSF6Q13247 344 aaKnown RBP11.11□□□□□ -0.63
USP49-201ENST00000373006 OR5B3Q8NH48 314 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 DSCAMO60469 2012 aa11.11□□□□□ -0.63
USP49-201ENST00000373006 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 OR4C46A6NHA9 309 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 C21orf140B9A014 251 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 PEX7O00628 323 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 CSN3P07498 182 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
USP49-201ENST00000373006 CGB3P0DN86 165 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 CGB7P0DN87 165 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 CD69Q07108 199 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 C9orf106Q8NAJ2 232 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 FNDC10F2Z333 226 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 COX7A2P2O60397 106 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 TM4SF20Q53R12 229 aa11.1□□□□□ -0.63
USP49-201ENST00000373006 WIPF2Q8TF74 440 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms