RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 RSPO2Q6UXX9 243 aaPredicted RBP12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 B5MCH6 92 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FOXL2P58012 376 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 TRA2AQ13595 282 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM27BQ5VT28 67 aa12.91□□□□□ -0.34
GTF3C4-201ENST00000372146 SOCS3O14543 225 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 UPK3AO75631 287 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 TRGV3P03979 118 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 TCF15Q12870 199 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 CT83Q5H943 113 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 R3HDMLQ9H3Y0 253 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 PMVKQ15126 192 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 FAM57AQ8TBR7 257 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 TRAV12-1A0A0B4J245 112 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 FCN3O75636 299 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 FBLIM1Q8WUP2 373 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 PF4P02776 101 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 DEFB104AQ8WTQ1 72 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
GTF3C4-201ENST00000372146 PLXNA3P51805 1871 aa12.9□□□□□ -0.35
GTF3C4-201ENST00000372146 SYS1-DBNDD2H3BUS1 97 aa12.9□□□□□ -0.35
GTF3C4-201ENST00000372146 INAFM2P0DMQ5 153 aa12.9□□□□□ -0.35
GTF3C4-201ENST00000372146 CT55Q8WUE5 264 aa12.9□□□□□ -0.35
GTF3C4-201ENST00000372146 PPDPFLQ8WWR9 84 aa12.9□□□□□ -0.35
GTF3C4-201ENST00000372146 SPANXCQ9NY87 97 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 EREGO14944 169 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 TIMP3P35625 211 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 F2Z2F3 143 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 UCP1P25874 307 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 A8MWP6 167 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 PPIFP30405 207 aaKnown RBP12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 COLCA2A8K830 154 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 CTGFP29279 349 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 ZNF576Q9H609 170 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 RLFQ13129 1914 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 CENPVQ7Z7K6 275 aaPredicted RBP12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 IFI27L2Q9H2X8 130 aa12.89□□□□□ -0.35
GTF3C4-201ENST00000372146 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 ITLN1Q8WWA0 313 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 FOXC1Q12948 553 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 OCC1Q8TAD7 63 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 JPT1Q9UK76 154 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 DEPPQ9NTK1 212 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
GTF3C4-201ENST00000372146 SMIM20Q8N5G0 67 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 NPIPB13A6NJU9 1138 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 LIMS1P48059 325 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 VN1R4Q7Z5H5 301 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 SAXO1Q8IYX7 474 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 PLEKHB2Q96CS7 222 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 K7EP13 123 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 TM4SF4P48230 202 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 ROS1P08922 2347 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 RTBDNQ9BSG5 229 aaPredicted RBP12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 UBL5Q9BZL1 73 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 CELA2BP08218 269 aaPredicted RBP12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 NPIPB5A8MRT5 1133 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 WNT2P09544 360 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 C1orf100Q5SVJ3 147 aa12.87□□□□□ -0.35
GTF3C4-201ENST00000372146 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 hADV29S1A0JD25 119 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 TCRAP04437 139 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 COL9A1P20849 921 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 TEX38Q6PEX7 206 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 FAM60AQ9NP50 221 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 LHFPL6Q9Y693 200 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 TEX43Q6ZNM6 134 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 NRTNQ99748 197 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 GAGE7O76087 117 aa12.86□□□□□ -0.35
GTF3C4-201ENST00000372146 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms