RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 C17orf98A8MV24 154 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 H3BP45 60 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 H3BUX3 64 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 MT-ND6P03923 174 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 BCL3P20749 454 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
LMO4-201ENST00000370542 ARL16Q0P5N6 197 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 FFAR4Q5NUL3 377 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 LINC01551Q86U37 167 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 OR5AU1Q8NGC0 362 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 DNAH3Q8TD57 4116 aa11.92□□□□□ -0.5
LMO4-201ENST00000370542 SAA2-SAA4A0A096LPE2 208 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 TRAV39A0A0B4J263 110 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 YPEL1O60688 119 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 RBP4P02753 201 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 IL6RP08887 468 aaPredicted RBP11.91□□□□□ -0.5
LMO4-201ENST00000370542 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
LMO4-201ENST00000370542 TOMM20LQ6UXN7 152 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 RNF2Q99496 336 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 ELOVL1Q9BW60 279 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
LMO4-201ENST00000370542 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
LMO4-201ENST00000370542 ODF3BA8MYP8 253 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 PAGE4O60829 102 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 NXPH2O95156 264 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 MT-CO2P00403 227 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 IGKV1-5P01602 117 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 CCL3L1P16619 93 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
LMO4-201ENST00000370542 CATR1Q13166 79 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 ARSJQ5FYB0 599 aaPredicted RBP11.9□□□□□ -0.5
LMO4-201ENST00000370542 TET2Q6N021 2002 aaPredicted RBP11.9□□□□□ -0.5
LMO4-201ENST00000370542 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 Q8IYB0 196 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 OR10G8Q8NGN5 311 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 SFRP2Q96HF1 295 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 GAL3ST2Q9H3Q3 398 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
LMO4-201ENST00000370542 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 C20orf202A1L168 122 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 RAB29O14966 203 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 NXPH3O95157 252 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 CRISP2P16562 243 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 PCP4P48539 62 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 Q6ZRM9 215 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 Q8N2B8 174 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 OR11H6Q8NGC7 330 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 WIPF2Q8TF74 440 aaPredicted RBP11.89□□□□□ -0.51
LMO4-201ENST00000370542 SLC25A22Q9H936 323 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 SLC45A2Q9UMX9 530 aa11.89□□□□□ -0.51
LMO4-201ENST00000370542 TBL2Q9Y4P3 447 aaKnown RBP11.89□□□□□ -0.51
LMO4-201ENST00000370542 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 TNFSF12O43508 249 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 IGKV1D-33P01593 117 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 IGKV1-33P01594 117 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 CD1BP29016 333 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 OR10J3Q5JRS4 329 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 SAPCD1Q5SSQ6 148 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 DYNAPQ8N1N2 210 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
LMO4-201ENST00000370542 SIGLEC9Q9Y336 463 aa11.88□□□□□ -0.51
LMO4-201ENST00000370542 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
LMO4-201ENST00000370542 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 BIRC6Q9NR09 4857 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 C9JCJ5 164 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 CHRNA7P36544 502 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
LMO4-201ENST00000370542 LY6EQ16553 131 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 KPRPQ5T749 579 aaPredicted RBP11.87□□□□□ -0.51
LMO4-201ENST00000370542 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 TCF23Q7RTU1 214 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 LHFPL4Q7Z7J7 247 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 FAM58AQ8N1B3 248 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 NPCDR1Q9BY65 106 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 GNB1LQ9BYB4 327 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 PLXNB1O43157 2135 aa11.87□□□□□ -0.51
LMO4-201ENST00000370542 CXorf1O96002 111 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms