RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PPT1P50897 306 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 RHOBP62745 196 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 IL17RELQ6ZVW7 336 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 IER3P46695 156 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 SELENOTP62341 195 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 ZNF48Q96MX3 618 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-202ENST00000369409 DOK5Q9P104 306 aa13.19□□□□□ -0.3
PHGDH-202ENST00000369409 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 ICAM4Q14773 271 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 ZNF506Q5JVG8 444 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 THYN1Q9P016 225 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 LINC00527Q9UJ94 153 aa13.18□□□□□ -0.3
PHGDH-202ENST00000369409 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 PSMB11A5LHX3 300 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 F8W036 122 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 CLN5O75503 358 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 NDUFB8O95169 186 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 IFNA1P01562 189 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 ARL14EPLP0DKL9 152 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 BCL2P10415 239 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 BLCAPP62952 87 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 KRTAP1-1Q07627 177 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 SPNS3Q6ZMD2 512 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 SLC35E3Q7Z769 313 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 RXFP4Q8TDU9 374 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 TMEM68Q96MH6 324 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 ZNF355PQ9NSJ1 428 aa13.17□□□□□ -0.3
PHGDH-202ENST00000369409 APOC3P02656 99 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 OR5G3P0C626 314 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
PHGDH-202ENST00000369409 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-202ENST00000369409 TIGITQ495A1 244 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 OR5R1Q8NH85 324 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 TMEM37Q8WXS4 190 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 FBXL7Q9UJT9 491 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 FUT9Q9Y231 359 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 MXRA5Q9NR99 2828 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 IGHG2P01859 326 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 C19orf54Q5BKX5 351 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 Q6YL49 198 aa13.16□□□□□ -0.3
PHGDH-202ENST00000369409 MFAP4P55083 255 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 Q6ZS46 218 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 OR1L4Q8NGR5 311 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 PFDN5Q99471 154 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 C19orf24Q9BVV8 132 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 SEC11CQ9BY50 192 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 VPREB3Q9UKI3 123 aa13.15□□□□□ -0.3
PHGDH-202ENST00000369409 GNG7O60262 68 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 CXorf1O96002 111 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 IGKV1-17P01599 117 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 IGF1P05019 195 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 NPBWR1P48145 328 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 RHOGP84095 191 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 Q56UQ5 140 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 SMDT1Q9H4I9 107 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-202ENST00000369409 CD5LO43866 347 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 PSG1P11464 419 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 PSMB3P49720 205 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 C15orf32Q32M92 178 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 PATE2Q6UY27 113 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 RBMS3Q6XE24 437 aaKnown RBP13.14□□□□□ -0.31
PHGDH-202ENST00000369409 OR1B1Q8NGR6 318 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-202ENST00000369409 UHRF2Q96PU4 802 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
PHGDH-202ENST00000369409 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
PHGDH-202ENST00000369409 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 HOXA3O43365 443 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-202ENST00000369409 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
PHGDH-202ENST00000369409 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
PHGDH-202ENST00000369409 ORM2P19652 201 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 MS4A10Q96PG2 267 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 RNF2Q99496 336 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
PHGDH-202ENST00000369409 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
PHGDH-202ENST00000369409 GCHFRP30047 84 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 CEBPGP53567 150 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms