RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 PRADC1Q9BSG0 188 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 FNDC4Q9H6D8 234 aaPredicted RBP14.86□□□□□ -0.03
SNX27-203ENST00000368843 TTC9CQ8N5M4 171 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 FLVCR1-AS1Q8TAF5 88 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 A0A087WV48 116 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 C19orf67A6NJJ6 358 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 SEPSECSQ9HD40 501 aaKnown RBP14.86□□□□□ -0.03
SNX27-203ENST00000368843 SHISA3A0PJX4 238 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 TRAV2A0A0B4J234 112 aa14.86□□□□□ -0.03
SNX27-203ENST00000368843 LINC00271P0C7V0 271 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 NEUROG1Q92886 237 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 RPL15P61313 204 aaKnown RBP14.85□□□□□ -0.03
SNX27-203ENST00000368843 LSM4Q9Y4Z0 139 aaKnown RBP14.85□□□□□ -0.03
SNX27-203ENST00000368843 ESPL1Q14674 2120 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 C3orf56Q8N813 242 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 EPDR1Q9UM22 224 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 ZNF257Q9Y2Q1 563 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 B4DSR2 109 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 H3BUX3 64 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 C15orf32Q32M92 178 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 SIPA1L1O43166 1804 aa14.85□□□□□ -0.03
SNX27-203ENST00000368843 TBX6O95947 436 aaPredicted RBP14.84□□□□□ -0.03
SNX27-203ENST00000368843 PHLDA1Q8WV24 401 aaPredicted RBP14.84□□□□□ -0.03
SNX27-203ENST00000368843 ADMP35318 185 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 EFNB1P98172 346 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 KLHL30-AS1Q8NEE0 82 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 RCHY1Q96PM5 261 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 PLSCR4Q9NRQ2 329 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 MBNL3Q9NUK0 354 aaKnown RBP14.84□□□□□ -0.03
SNX27-203ENST00000368843 PSG8Q9UQ74 426 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 IGKV2-40A0A087WW87 121 aaPredicted RBP14.84□□□□□ -0.03
SNX27-203ENST00000368843 IGLV3-32A0A0A0MS00 114 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 IL18BPO95998 194 aa14.84□□□□□ -0.03
SNX27-203ENST00000368843 IGKV2D-40P01614 121 aaPredicted RBP14.84□□□□□ -0.03
SNX27-203ENST00000368843 IFITM2Q01629 132 aa14.83□□□□□ -0.03
SNX27-203ENST00000368843 TDGF1P3P51864 188 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 SRSF1Q07955 248 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNX27-203ENST00000368843 TPTE2P1Q5T6R2 138 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 TMEM178BH3BS89 294 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 OVOL1O14753 267 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 GZMBP10144 247 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 SELLP14151 372 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 CSRP3P50461 194 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 PRCDQ00LT1 54 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 LCNL1Q6ZST4 164 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 IGHV3-53P01767 116 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 SRSF3P84103 164 aaKnown RBP14.83□□□□□ -0.04
SNX27-203ENST00000368843 LAIR2Q6ISS4 152 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 GGNQ86UU5 652 aa14.83□□□□□ -0.04
SNX27-203ENST00000368843 DUTP33316 252 aaKnown RBP14.83□□□□□ -0.04
SNX27-203ENST00000368843 ANK1P16157 1881 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 SRP19P09132 144 aaKnown RBP14.82□□□□□ -0.04
SNX27-203ENST00000368843 FOXG1P55316 489 aaPredicted RBP14.82□□□□□ -0.04
SNX27-203ENST00000368843 ACTL10Q5JWF8 245 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 COQ2Q96H96 371 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 PGPEP1LA6NFU8 196 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 IGHV1-8P0DP01 117 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 RNF182Q8N6D2 247 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 PCP4P48539 62 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 CMC4P56277 68 aaPredicted RBP14.82□□□□□ -0.04
SNX27-203ENST00000368843 NDPQ00604 133 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 PAQR4Q8N4S7 273 aaPredicted RBP14.82□□□□□ -0.04
SNX27-203ENST00000368843 PAX2Q02962 417 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 TNFRSF14Q92956 283 aa14.82□□□□□ -0.04
SNX27-203ENST00000368843 IGHV1-3A0A0C4DH29 117 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 GREB1LQ9C091 1923 aaPredicted RBP14.81□□□□□ -0.04
SNX27-203ENST00000368843 IGKV1-9A0A0C4DH69 117 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 CKS1BP61024 79 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 SSC4DQ8WTU2 575 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 APC2O95996 2303 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 TRAV8-2A0A0B4J237 113 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 Q0VFX4 171 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 H3BUT2 72 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 C1QL4Q86Z23 238 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 LINC01356Q8N9X3 169 aa14.81□□□□□ -0.04
SNX27-203ENST00000368843 A0A087WX48 190 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 CRIM1Q9NZV1 1036 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 TRAV5A0A0B4J249 113 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 PEF1Q9UBV8 284 aaKnown RBP14.8□□□□□ -0.04
SNX27-203ENST00000368843 CHTOPQ9Y3Y2 248 aaKnown RBP14.8□□□□□ -0.04
SNX27-203ENST00000368843 LINC00158P58513 81 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 S100A7L2Q5SY68 101 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 ZNF318Q5VUA4 2279 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 CYSLTR1Q9Y271 337 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 SPCS1Q9Y6A9 102 aa14.8□□□□□ -0.04
SNX27-203ENST00000368843 A0A0A6YYD4 124 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 ZNF319Q9P2F9 582 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 NPIPB5A8MRT5 1133 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 SP5Q6BEB4 398 aaPredicted RBP14.79□□□□□ -0.04
SNX27-203ENST00000368843 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 CCL1P22362 96 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 C10orf55Q5SWW7 151 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 ZNF329Q86UD4 541 aa14.79□□□□□ -0.04
SNX27-203ENST00000368843 DMRTC2Q8IXT2 367 aaPredicted RBP14.78□□□□□ -0.04
SNX27-203ENST00000368843 UBE2E2Q96LR5 201 aa14.78□□□□□ -0.04
SNX27-203ENST00000368843 NHP2Q9NX24 153 aaKnown RBP14.78□□□□□ -0.04
SNX27-203ENST00000368843 SLC25A15Q9Y619 301 aa14.78□□□□□ -0.04
SNX27-203ENST00000368843 DERL1Q9BUN8 251 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms