RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 UBE2MP61081 183 aaKnown RBP14.06□□□□□ -0.16
CKS1B-203ENST00000368439 GGTLC1Q9BX51 225 aa14.06□□□□□ -0.16
CKS1B-203ENST00000368439 FLVCR2Q9UPI3 526 aa14.06□□□□□ -0.16
CKS1B-203ENST00000368439 TMED3Q9Y3Q3 217 aa14.06□□□□□ -0.16
CKS1B-203ENST00000368439 SACSQ9NZJ4 4579 aa14.06□□□□□ -0.16
CKS1B-203ENST00000368439 IFNA10P01566 189 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 CRYBB3P26998 211 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 CASC10Q5T4H9 136 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 TCF24Q7RTU0 167 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 NOXA1Q86UR1 476 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 OR1S2Q8NGQ3 325 aa14.05□□□□□ -0.16
CKS1B-203ENST00000368439 IGHV3-66A0A0C4DH42 116 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 LINC00854A0A1B0GVQ3 168 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 C9orf170A2RU37 121 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 DFFBO76075 338 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 OR10J1P30954 320 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 YPEL3P61236 119 aaPredicted RBP14.04□□□□□ -0.16
CKS1B-203ENST00000368439 ETFRF1Q6IPR1 90 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
CKS1B-203ENST00000368439 C7orf50Q9BRJ6 194 aaKnown RBP14.04□□□□□ -0.16
CKS1B-203ENST00000368439 IGKV3-7A0A075B6H7 116 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 FAM90A26D6RGX4 464 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 PLA2G10O15496 165 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 SCGB2A1O75556 95 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 CD5P06127 495 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 HOXB5P09067 269 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 NPPCP23582 126 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 TFPI2P48307 235 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 ATP5IP56385 69 aaPredicted RBP14.03□□□□□ -0.16
CKS1B-203ENST00000368439 GGNBP1Q5YKI7 109 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 GBGT1Q8N5D6 347 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 U3KQE9 123 aa14.03□□□□□ -0.16
CKS1B-203ENST00000368439 BMI1P35226 326 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 ZNF124Q15973 351 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 METTL26Q96S19 204 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 OVOL2Q9BRP0 275 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 MS4A6AQ9H2W1 248 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 RYR2Q92736 4967 aa14.02□□□□□ -0.17
CKS1B-203ENST00000368439 ADAP1O75689 374 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 OR4E1P0C645 316 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 IAPPP10997 89 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 DHRS2Q13268 280 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 ACY3Q96HD9 319 aa14.01□□□□□ -0.17
CKS1B-203ENST00000368439 TRAV2A0A0B4J234 112 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 A0A1W2PS18 150 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 CENPXA8MT69 81 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 MPTX1A8MV57 137 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 TOMM40O96008 361 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 IFNA4P05014 189 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 LYL1P12980 280 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 ANXA7P20073 488 aaKnown RBP14□□□□□ -0.17
CKS1B-203ENST00000368439 GPX4P36969 197 aaPredicted RBP14□□□□□ -0.17
CKS1B-203ENST00000368439 GAMTQ14353 236 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 USF2Q15853 346 aaPredicted RBP14□□□□□ -0.17
CKS1B-203ENST00000368439 LYG2Q86SG7 212 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 Q8WTZ3 238 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 MAGT1Q9H0U3 335 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 TMEM231Q9H6L2 316 aa14□□□□□ -0.17
CKS1B-203ENST00000368439 IGKV1D-37A0A075B6S9 117 aa13.99□□□□□ -0.17
CKS1B-203ENST00000368439 SYNGR2O43760 224 aa13.99□□□□□ -0.17
CKS1B-203ENST00000368439 P2RY1P47900 373 aa13.99□□□□□ -0.17
CKS1B-203ENST00000368439 CMC4P56277 68 aaPredicted RBP13.99□□□□□ -0.17
CKS1B-203ENST00000368439 PAFAH1B2P68402 229 aa13.99□□□□□ -0.17
CKS1B-203ENST00000368439 FAM24BQ8N5W8 94 aa13.99□□□□□ -0.17
CKS1B-203ENST00000368439 KIR2DL5BA0A0G2JN68 375 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 KIR2DL5BA0A0G2JPC4 375 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 MED6O75586 246 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 PSG1P11464 419 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 APOC4P55056 127 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 ID3Q02535 119 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 WFDC3Q8IUB2 231 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 KIR2DL5AQ8N109 375 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
CKS1B-203ENST00000368439 LYSTQ99698 3801 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 K7EQG2 157 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 LYRM1O43325 122 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 IL4P05112 153 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
CKS1B-203ENST00000368439 RD3LP0DJH9 198 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 RPL35AP18077 110 aaKnown RBP13.97□□□□□ -0.17
CKS1B-203ENST00000368439 CNPY1Q3B7I2 92 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 C16orf54Q6UWD8 224 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 LINC00299Q6ZSB3 139 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 Q6ZWC4 215 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 OR4D5Q8NGN0 318 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 COQ8AQ8NI60 647 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 GLMPQ8WWB7 406 aa13.97□□□□□ -0.17
CKS1B-203ENST00000368439 CIB3Q96Q77 187 aaPredicted RBP13.97□□□□□ -0.17
CKS1B-203ENST00000368439 PLECQ15149 4684 aaKnown RBP13.97□□□□□ -0.17
CKS1B-203ENST00000368439 A6NHS1 94 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 DNASE2O00115 360 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-203ENST00000368439 WRBO00258 174 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 UBE2CO00762 179 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 RAB11AP62491 216 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 RPL11P62913 178 aaKnown RBP13.96□□□□□ -0.17
CKS1B-203ENST00000368439 ZNF90Q03938 601 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 C4orf46Q504U0 113 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms