RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 VDAC2P45880 294 aaPredicted RBP9.67□□□□□ -0.86
USF1-203ENST00000368021 FHITP49789 147 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 PRCDQ00LT1 54 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 ZNF266Q14584 549 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 RPL7L1Q6DKI1 246 aaKnown RBP9.67□□□□□ -0.86
USF1-203ENST00000368021 OR5C1Q8NGR4 320 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 RITA1Q96K30 269 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 GINS3Q9BRX5 216 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 YAE1D1Q9NRH1 226 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 FN1P02751 2386 aaKnown RBP9.67□□□□□ -0.86
USF1-203ENST00000368021 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 C9JQL5 133 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 INAFM1C9JVW0 142 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 H3BQ15 152 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 NPFFO15130 113 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SLC25A17O43808 307 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 TOMM40O96008 361 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 CRYGBP07316 175 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SAA4P35542 130 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
USF1-203ENST00000368021 HBG1P69891 147 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 HBG2P69892 147 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 AJUBAQ96IF1 538 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 COMMD5Q9GZQ3 224 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 HIF1ANQ9NWT6 349 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
USF1-203ENST00000368021 TEX50A0A1B0GTY4 177 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 CBY3A6NI87 242 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 MOSP00540 346 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 DYNLT3P51808 116 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 RPL19P84098 196 aaKnown RBP9.66□□□□□ -0.86
USF1-203ENST00000368021 OR5I1Q13606 314 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 EBI3Q14213 229 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 PSG5Q15238 335 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 OR1L8Q8NGR8 309 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 FRZBQ92765 325 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SLC35E1Q96K37 410 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 C7orf69Q9H7B7 122 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 ZNF430Q9H8G1 570 aaPredicted RBP9.66□□□□□ -0.86
USF1-203ENST00000368021 WFDC1Q9HC57 220 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
USF1-203ENST00000368021 NDUFA4L2Q9NRX3 87 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 SIGLEC9Q9Y336 463 aa9.66□□□□□ -0.86
USF1-203ENST00000368021 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 IGHV1-69DA0A0B4J2H0 117 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 TMEM238C9JI98 176 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 K7ERU9 68 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 CD5LO43866 347 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
USF1-203ENST00000368021 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
USF1-203ENST00000368021 LINC01551Q86U37 167 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 MMD2Q8IY49 270 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 NPBQ8NG41 125 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 OR4C12Q96R67 309 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 ATP5SQ99766 215 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 PLEKHA3Q9HB20 300 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 ENY2Q9NPA8 101 aa9.65□□□□□ -0.86
USF1-203ENST00000368021 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 C15orf62A8K5M9 175 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 PMS2P5A8MQ11 134 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 J3QLI3 93 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 PRSS8Q16651 343 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 MRGPRG-AS1Q2M3A8 158 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 ETFRF1Q6IPR1 90 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 ZNF705AQ6ZN79 300 aaPredicted RBP9.64□□□□□ -0.87
USF1-203ENST00000368021 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 PINX1Q96BK5 328 aaKnown RBP9.64□□□□□ -0.87
USF1-203ENST00000368021 NUDT11Q96G61 164 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
USF1-203ENST00000368021 NAGKQ9UJ70 344 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
USF1-203ENST00000368021 TRAV40A0A0B4J280 105 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 RBFOX3A6NFN3 312 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 RRHO14718 337 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 AGPAT2O15120 278 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 NBR2O15453 112 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 NDUFA3O95167 84 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 CNTFRP26992 372 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 RPL29P47914 159 aaKnown RBP9.63□□□□□ -0.87
USF1-203ENST00000368021 PAFAH1B2P68402 229 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ZNF616Q08AN1 781 aa9.63□□□□□ -0.87
USF1-203ENST00000368021 ARL16Q0P5N6 197 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms