RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ASCL2Q99929 193 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 A8MWP6 167 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR9G4Q8NGQ1 327 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 TM4SF20Q53R12 229 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 TEX45Q8NA69 505 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 DEPPQ9NTK1 212 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 NKX2-8O15522 239 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 ORAOV1Q8WV07 137 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 MGST2Q99735 147 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 APOHP02749 345 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 TSPOP30536 169 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 NCOR1P1Q9H4R4 102 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 DPM3Q9P2X0 92 aa9.8□□□□□ -0.84
CDC42BPA-202ENST00000366764 A0A1B0GV72 72 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR9G9P0C7N8 305 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 TRGV9Q99603 122 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 MGPP08493 103 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 VSIRQ9H7M9 311 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 AKIRIN1Q9H9L7 192 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 DCAF16Q9NXF7 216 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 UQCRFS1P47985 274 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 Q0VG73 95 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 RAB37Q96AX2 223 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 REG1AP05451 166 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 GPR183P32249 361 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 ZNF502Q8TBZ5 544 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
CDC42BPA-202ENST00000366764 B3GALT5-AS1P59052 145 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 C5orf30Q96GV9 206 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 MMP23AO75900 390 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGLV3-1P01715 115 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 C17orf100A8MU93 164 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 C9JQL5 133 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 FOXF2Q12947 444 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 KLHDC3Q9BQ90 382 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 TMEM208Q9BTX3 173 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 COL4A6Q14031 1691 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 APOBEC3AP31941 199 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 CT83Q5H943 113 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 SGK494Q96LW2 274 aa9.78□□□□□ -0.84
CDC42BPA-202ENST00000366764 IGHV3-72A0A0B4J1Y9 119 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 SPAARA0A1B0GVQ0 90 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 HBDP02042 147 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 HILPDAQ9Y5L2 63 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 NPIPB6E9PJ23 425 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 FDCSPQ8NFU4 85 aa9.77□□□□□ -0.84
CDC42BPA-202ENST00000366764 TRBV20OR9-2A0A075B6H5 130 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 CSRP2Q16527 193 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 DCTN5Q9BTE1 182 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 LOC105371242A0A075B767 164 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 UNQ5815/PRO19632Q6UWF5 114 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNF71Q9NQZ8 489 aaPredicted RBP9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 SH2D7A6NKC9 451 aaPredicted RBP9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 F2Z2F3 143 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 FGFBP3Q8TAT2 258 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 RNF5Q99942 180 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 TMEM133Q9H2Q1 129 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 NPPCP23582 126 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 FAM53AQ6NSI3 398 aaPredicted RBP9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 FAM216BQ8N7L0 139 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 Q8NFD4 153 aa9.77□□□□□ -0.85
CDC42BPA-202ENST00000366764 EBLN2Q6P2I7 272 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNF841Q6ZN19 808 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 CCL21O00585 134 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 C8orf46Q8TAG6 207 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 FER1L6-AS1Q8NA97 138 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 SP9P0CG40 484 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 FBLN7Q53RD9 439 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 LRP4O75096 1905 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 GFRA3O60609 400 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 ZNF256Q9Y2P7 627 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-202ENST00000366764 DLEU1O43261 78 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 LMO1P25800 156 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
CDC42BPA-202ENST00000366764 TECTAO75443 2155 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms