RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 C19orf35Q6ZS72 473 aa7.59□□□□□ -1.2
CALD1-202ENST00000361901 OR2T6Q8NHC8 308 aa7.59□□□□□ -1.2
CALD1-202ENST00000361901 RNASE6Q93091 150 aaKnown RBP7.59□□□□□ -1.2
CALD1-202ENST00000361901 ATMQ13315 3056 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 NDUFB4O95168 129 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 PDLIM3Q53GG5 364 aaPredicted RBP7.58□□□□□ -1.2
CALD1-202ENST00000361901 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
CALD1-202ENST00000361901 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 MSI2Q96DH6 328 aaKnown RBP7.58□□□□□ -1.2
CALD1-202ENST00000361901 ZNRD1Q9P1U0 126 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 CA7P43166 264 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 DLX1P56177 255 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 ZNF645Q8N7E2 425 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 OR8B3Q8NGG8 313 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 QTRT1Q9BXR0 403 aaKnown RBP7.58□□□□□ -1.2
CALD1-202ENST00000361901 HILPDAQ9Y5L2 63 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 PXMP4Q9Y6I8 212 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 NOTCH3Q9UM47 2321 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 A1L4Q6 167 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 RTL8BQ17RB0 113 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 RPEL1Q2QD12 228 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 SCRT1Q9BWW7 348 aa7.58□□□□□ -1.2
CALD1-202ENST00000361901 E7EQL1 145 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 CA2P00918 260 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 LGALS4P56470 323 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 C11orf53Q8IXP5 236 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 OR10G4Q8NGN3 311 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 OR10G9Q8NGN4 311 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 OR10G7Q8NGN6 311 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 DOPEY2Q9Y3R5 2298 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 ZNF462Q96JM2 2506 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 IGLC7A0M8Q6 106 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 GPX1P07203 203 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
CALD1-202ENST00000361901 UBE2G1P62253 170 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 TRAT1Q6PIZ9 186 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 PCSK4Q6UW60 755 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 ZNF714Q96N38 554 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 ADGRG4Q8IZF6 3080 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 ARHGAP32A7KAX9 2087 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 TMEM250H0YL14 139 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 J3KRW8 73 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 COMMD5Q9GZQ3 224 aa7.57□□□□□ -1.2
CALD1-202ENST00000361901 A0A087X0K7 114 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 IGHV2-26A0A0B4J1V2 119 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 RPL30P62888 115 aaKnown RBP7.56□□□□□ -1.2
CALD1-202ENST00000361901 Q6ZSR3 168 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 RAB1CQ92928 201 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 PTPRBP23467 1997 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 B9A039 149 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 ZNF324O75467 553 aaPredicted RBP7.56□□□□□ -1.2
CALD1-202ENST00000361901 CD1BP29016 333 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 SLC38A11Q08AI6 406 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 SSX8Q7RTT4 187 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 BLNKQ8WV28 456 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 MRAP2Q96G30 205 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 OR8B2Q96RD0 313 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 HSD17B10Q99714 261 aaKnown RBP7.56□□□□□ -1.2
CALD1-202ENST00000361901 G3V4G9 280 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 SLC17A3O00476 420 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 Q6ZPA2 131 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 RAB40CQ96S21 281 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 SRSF8Q9BRL6 282 aaKnown RBP7.56□□□□□ -1.2
CALD1-202ENST00000361901 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 NAV2Q8IVL1 2488 aa7.56□□□□□ -1.2
CALD1-202ENST00000361901 A0A0G2JRQ6 117 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 PF4V1P10720 104 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 GUSBP1Q15486 140 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 DCHS1Q96JQ0 3298 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 GAGE12HA6NDE8 117 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 CD5LO43866 347 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 THBDP07204 575 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
CALD1-202ENST00000361901 MORN2Q502X0 79 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 OR4C12Q96R67 309 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 FAM222BQ8WU58 562 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 RPEQ96AT9 228 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 ANAPC10Q9UM13 185 aa7.55□□□□□ -1.2
CALD1-202ENST00000361901 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
CALD1-202ENST00000361901 IGHV3-48P01763 117 aa7.54□□□□□ -1.2
CALD1-202ENST00000361901 FCER1GP30273 86 aa7.54□□□□□ -1.2
CALD1-202ENST00000361901 GPR183P32249 361 aa7.54□□□□□ -1.2
CALD1-202ENST00000361901 LGALS7P47929 136 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms