RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ELOVL1Q9BW60 279 aa10.59□□□□□ -0.71
NSMCE1-201ENST00000361439 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
NSMCE1-201ENST00000361439 A8MWP6 167 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 H0YIZ8 118 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 WIPF1O43516 503 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 FABP1P07148 127 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 OR10J1P30954 320 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 SYNJ2BPP57105 145 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 ATP6V1FQ16864 119 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 OR8G2PQ6IF36 304 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 ZNF600Q6ZNG1 722 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
NSMCE1-201ENST00000361439 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 K7EMT4 169 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 ACOT7LQ6ZUV0 252 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 THAP8Q8NA92 274 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 TMEM190Q8WZ59 177 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 MARC2Q969Z3 335 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 NPVFQ9HCQ7 196 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-201ENST00000361439 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 CFDP00746 253 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 TRGV9Q99603 122 aa10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 ZMAT5Q9UDW3 170 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-201ENST00000361439 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 ZFP92A6NM28 416 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 CST7O76096 145 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 VWC2Q2TAL6 325 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 HAPLN4Q86UW8 402 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 Q8WTZ3 238 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 ZC4H2Q9NQZ6 224 aa10.55□□□□□ -0.72
NSMCE1-201ENST00000361439 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 SEC14L6B5MCN3 397 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 CCNKO75909 580 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 TOMM40O96008 361 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 RD3LP0DJH9 198 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 RPL12P30050 165 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 ARL16Q0P5N6 197 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 TIGITQ495A1 244 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 TEPPQ6URK8 271 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 UQCC1Q9NVA1 299 aa10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
NSMCE1-201ENST00000361439 IGKV1D-37A0A075B6S9 117 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 SMCO3A2RU48 225 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 YIF1AO95070 293 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 CSN3P07498 182 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 BMI1P35226 326 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 NUP62P37198 522 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 SELENOTP62341 195 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 RAB31Q13636 194 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 UNQ9165/PRO28630Q6UXU0 137 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 TMEM217Q8N7C4 229 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 OR51G1Q8NGK1 321 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 TMEM147Q9BVK8 224 aa10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 TECRQ9NZ01 308 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-201ENST00000361439 IGHV3-35A0A0C4DH35 117 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 MPDU1O75352 247 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 SAP30O75446 220 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 CD5P06127 495 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 PSG1P11464 419 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 IGLL1P15814 213 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 CBLN1P23435 193 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 NHLH2Q02577 135 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 INO80EQ8NBZ0 244 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.73
NSMCE1-201ENST00000361439 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms