RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 H3BMM0 161 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 ELK1P19419 428 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 SNRPD3P62318 126 aaKnown RBP15.12■□□□□ 0.01
CD47-202ENST00000361309 LGALS9BQ3B8N2 356 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 RNASE12Q5GAN4 147 aaKnown RBP15.12■□□□□ 0.01
CD47-202ENST00000361309 Q6ZRM9 215 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 OR1S2Q8NGQ3 325 aa15.12■□□□□ 0.01
CD47-202ENST00000361309 RNASE11Q8TAA1 199 aaKnown RBP15.12■□□□□ 0.01
CD47-202ENST00000361309 RRNAD1Q96FB5 475 aaKnown RBP15.12■□□□□ 0.01
CD47-202ENST00000361309 OR10J1P30954 320 aa15.11■□□□□ 0.01
CD47-202ENST00000361309 RND2P52198 227 aa15.11■□□□□ 0.01
CD47-202ENST00000361309 YPEL3P61236 119 aaPredicted RBP15.11■□□□□ 0.01
CD47-202ENST00000361309 DHODHQ02127 395 aa15.11■□□□□ 0.01
CD47-202ENST00000361309 USF2Q15853 346 aaPredicted RBP15.11■□□□□ 0.01
CD47-202ENST00000361309 RNASE10Q5GAN6 216 aaKnown RBP15.11■□□□□ 0.01
CD47-202ENST00000361309 PRSS54Q6PEW0 395 aa15.11■□□□□ 0.01
CD47-202ENST00000361309 COPZ2Q9P299 210 aa15.11■□□□□ 0.01
CD47-202ENST00000361309 NACAE9PAV3 2078 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 HPGDSO60760 199 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 UCP1P25874 307 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 HTR2BP41595 481 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 SPCS3P61009 180 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 NRN1Q9NPD7 142 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 KLK11Q9UBX7 282 aa15.1■□□□□ 0.01
CD47-202ENST00000361309 ABCA13Q86UQ4 5058 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 IGLV2-18A0A075B6J9 118 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 IFNA10P01566 189 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 CD3DP04234 171 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 IL4P05112 153 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 SPART-AS1P0CW21 52 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 EMP1P54849 157 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 ARRDC1Q8N5I2 433 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 CCDC71LQ8N9Z2 235 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 NEU1Q99519 415 aa15.09■□□□□ 0.01
CD47-202ENST00000361309 SEPSECSQ9HD40 501 aaKnown RBP15.09■□□□□ 0.01
CD47-202ENST00000361309 HEYLQ9NQ87 328 aaPredicted RBP15.09■□□□□ 0.01
CD47-202ENST00000361309 IFNA21P01568 189 aa15.08■□□□□ 0
CD47-202ENST00000361309 SLC25A4P12235 298 aa15.08■□□□□ 0
CD47-202ENST00000361309 HLA-DRB4P13762 266 aa15.08■□□□□ 0
CD47-202ENST00000361309 C2orf83Q53S99 150 aa15.08■□□□□ 0
CD47-202ENST00000361309 SIGLEC15Q6ZMC9 328 aa15.08■□□□□ 0
CD47-202ENST00000361309 ZNF705AQ6ZN79 300 aaPredicted RBP15.08■□□□□ 0
CD47-202ENST00000361309 UBE2DNLQ8IWF7 75 aa15.08■□□□□ 0
CD47-202ENST00000361309 OR52E5Q8NH55 327 aa15.08■□□□□ 0
CD47-202ENST00000361309 ZFAND1Q8TCF1 268 aa15.08■□□□□ 0
CD47-202ENST00000361309 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.08■□□□□ 0
CD47-202ENST00000361309 HLA-DRB4X5D2U9 266 aa15.08■□□□□ 0
CD47-202ENST00000361309 ZNF705FA8MVS1 300 aaPredicted RBP15.07■□□□□ 0
CD47-202ENST00000361309 BUB3O43684 328 aa15.07■□□□□ 0
CD47-202ENST00000361309 CD74P04233 296 aa15.07■□□□□ 0
CD47-202ENST00000361309 ZNF705DP0CH99 300 aaPredicted RBP15.07■□□□□ 0
CD47-202ENST00000361309 ZNF705BP0CI00 300 aaPredicted RBP15.07■□□□□ 0
CD47-202ENST00000361309 NCS1P62166 190 aa15.07■□□□□ 0
CD47-202ENST00000361309 AARDQ4LEZ3 155 aa15.07■□□□□ 0
CD47-202ENST00000361309 OR4D10Q8NGI6 311 aa15.07■□□□□ 0
CD47-202ENST00000361309 OR13C8Q8NGS7 320 aa15.07■□□□□ 0
CD47-202ENST00000361309 OR52I2Q8NH67 350 aa15.07■□□□□ 0
CD47-202ENST00000361309 RNASEH2CQ8TDP1 164 aaKnown RBP15.07■□□□□ 0
CD47-202ENST00000361309 IGHV3OR16-12A0A075B7B8 117 aa15.06■□□□□ 0
CD47-202ENST00000361309 TMEM189A5PLL7 270 aa15.06■□□□□ 0
CD47-202ENST00000361309 IGKV3-20P01619 116 aa15.06■□□□□ 0
CD47-202ENST00000361309 FXYD7P58549 80 aa15.06■□□□□ 0
CD47-202ENST00000361309 GDF5OSQ5U4N7 250 aa15.06■□□□□ 0
CD47-202ENST00000361309 Q6ZR54 194 aa15.06■□□□□ 0
CD47-202ENST00000361309 FAM219AQ8IW50 185 aa15.06■□□□□ 0
CD47-202ENST00000361309 TERB2Q8NHR7 220 aa15.06■□□□□ 0
CD47-202ENST00000361309 NPIPB3Q92617 1050 aa15.06■□□□□ 0
CD47-202ENST00000361309 SMIM9A6NGZ8 99 aa15.05■□□□□ -0
CD47-202ENST00000361309 FAM25AB3EWG3 89 aa15.05■□□□□ -0
CD47-202ENST00000361309 FAM25CB3EWG5 89 aa15.05■□□□□ -0
CD47-202ENST00000361309 FAM25GB3EWG6 89 aa15.05■□□□□ -0
CD47-202ENST00000361309 GSTZ1O43708 216 aaPredicted RBP15.05■□□□□ -0
CD47-202ENST00000361309 B3GALNT1O75752 331 aa15.05■□□□□ -0
CD47-202ENST00000361309 NXPH3O95157 252 aa15.05■□□□□ -0
CD47-202ENST00000361309 CDS2O95674 445 aa15.05■□□□□ -0
CD47-202ENST00000361309 RD3LP0DJH9 198 aa15.05■□□□□ -0
CD47-202ENST00000361309 NKX2-1P43699 371 aaPredicted RBP15.05■□□□□ -0
CD47-202ENST00000361309 DEFB1P60022 68 aa15.05■□□□□ -0
CD47-202ENST00000361309 VBP1P61758 197 aa15.05■□□□□ -0
CD47-202ENST00000361309 SCGB2B2Q4G0G5 96 aa15.05■□□□□ -0
CD47-202ENST00000361309 SLC24A4Q8NFF2 622 aa15.05■□□□□ -0
CD47-202ENST00000361309 LHFPL5Q8TAF8 219 aa15.05■□□□□ -0
CD47-202ENST00000361309 MARCH1Q8TCQ1 289 aa15.05■□□□□ -0
CD47-202ENST00000361309 TMEM170AQ8WVE7 144 aa15.05■□□□□ -0
CD47-202ENST00000361309 VCX3AQ9NNX9 186 aa15.05■□□□□ -0
CD47-202ENST00000361309 CEBPZOSA8MTT3 80 aa15.04■□□□□ -0
CD47-202ENST00000361309 TOMM40O96008 361 aa15.04■□□□□ -0
CD47-202ENST00000361309 OR5AC1P0C628 307 aa15.04■□□□□ -0
CD47-202ENST00000361309 TBPP20226 339 aa15.04■□□□□ -0
CD47-202ENST00000361309 ETFRF1Q6IPR1 90 aa15.04■□□□□ -0
CD47-202ENST00000361309 ZNF575Q86XF7 245 aa15.04■□□□□ -0
CD47-202ENST00000361309 GPR146Q96CH1 333 aa15.04■□□□□ -0
CD47-202ENST00000361309 ACY3Q96HD9 319 aa15.04■□□□□ -0
CD47-202ENST00000361309 FAM210BQ96KR6 192 aa15.04■□□□□ -0
CD47-202ENST00000361309 TMEM222Q9H0R3 208 aa15.04■□□□□ -0
CD47-202ENST00000361309 MTFP1Q9UDX5 166 aa15.04■□□□□ -0
CD47-202ENST00000361309 CACNG5Q9UF02 275 aa15.04■□□□□ -0
CD47-202ENST00000361309 OR51G1Q8NGK1 321 aa15.03■□□□□ -0
CD47-202ENST00000361309 GLYATL2Q8WU03 294 aa15.03■□□□□ -0
CD47-202ENST00000361309 NIPSNAP3BQ9BS92 247 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms