RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RAB24Q969Q5 203 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 FBXL7Q9UJT9 491 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 MAP1LC3B2A6NCE7 125 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 CLN5O75503 358 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 HBE1P02100 147 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 SELENOTP62341 195 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 NOL4LQ96MY1 436 aaPredicted RBP18.13■□□□□ 0.49
SDF4-202ENST00000360001 SMR3AQ99954 134 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 MAP1LC3BQ9GZQ8 125 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 S4R3C0 116 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 S100A1P23297 94 aa18.12■□□□□ 0.49
SDF4-202ENST00000360001 CDC34P49427 236 aaPredicted RBP18.12■□□□□ 0.49
SDF4-202ENST00000360001 FGF8P55075 233 aaPredicted RBP18.12■□□□□ 0.49
SDF4-202ENST00000360001 SRSF3P84103 164 aaKnown RBP18.12■□□□□ 0.49
SDF4-202ENST00000360001 AP4M1O00189 453 aa18.11■□□□□ 0.49
SDF4-202ENST00000360001 HMGB3O15347 200 aaKnown RBP18.11■□□□□ 0.49
SDF4-202ENST00000360001 ZNF355PQ9NSJ1 428 aa18.11■□□□□ 0.49
SDF4-202ENST00000360001 F8W735 103 aaPredicted RBP18.11■□□□□ 0.49
SDF4-202ENST00000360001 FLNBO75369 2602 aaKnown RBP18.11■□□□□ 0.49
SDF4-202ENST00000360001 HNF1AP20823 631 aa18.11■□□□□ 0.49
SDF4-202ENST00000360001 SCRT1Q9BWW7 348 aa18.11■□□□□ 0.49
SDF4-202ENST00000360001 PSMB11A5LHX3 300 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 IGKV1-17P01599 117 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 PPIFP30405 207 aaKnown RBP18.1■□□□□ 0.49
SDF4-202ENST00000360001 MFAP4P55083 255 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 RHOGP84095 191 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 FAM210AQ96ND0 272 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 TMEM160Q9NX00 188 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 C21orf62Q9NYP8 219 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 A0A1W2PPV4 95 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 I3L521 148 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 NPBWR1P48145 328 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 UQCC3Q6UW78 93 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 VN1R17PQ8TDU5 208 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 SEPSECSQ9HD40 501 aaKnown RBP18.1■□□□□ 0.49
SDF4-202ENST00000360001 ZNF580Q9UK33 172 aa18.1■□□□□ 0.49
SDF4-202ENST00000360001 C15orf32Q32M92 178 aa18.09■□□□□ 0.49
SDF4-202ENST00000360001 TIGITQ495A1 244 aa18.09■□□□□ 0.49
SDF4-202ENST00000360001 NECAP1Q8NC96 275 aa18.09■□□□□ 0.49
SDF4-202ENST00000360001 MS4A10Q96PG2 267 aa18.09■□□□□ 0.49
SDF4-202ENST00000360001 DUX5Q96PT3 197 aa18.09■□□□□ 0.49
SDF4-202ENST00000360001 SPATA31B1PQ5VZV4 182 aa18.08■□□□□ 0.49
SDF4-202ENST00000360001 TMEM86BQ8N661 226 aa18.08■□□□□ 0.49
SDF4-202ENST00000360001 TMEM37Q8WXS4 190 aa18.08■□□□□ 0.49
SDF4-202ENST00000360001 TMEM231Q9H6L2 316 aa18.08■□□□□ 0.49
SDF4-202ENST00000360001 ANKRD34BA5PLL1 514 aa18.08■□□□□ 0.48
SDF4-202ENST00000360001 LY6G6DO95868 133 aa18.08■□□□□ 0.48
SDF4-202ENST00000360001 IGHV3-23P01764 117 aa18.08■□□□□ 0.48
SDF4-202ENST00000360001 RHOBP62745 196 aa18.08■□□□□ 0.48
SDF4-202ENST00000360001 TMEM95Q3KNT9 176 aa18.08■□□□□ 0.48
SDF4-202ENST00000360001 FCGR2BP31994 310 aaPredicted RBP18.07■□□□□ 0.48
SDF4-202ENST00000360001 GUK1Q16774 197 aa18.07■□□□□ 0.48
SDF4-202ENST00000360001 C19orf24Q9BVV8 132 aa18.07■□□□□ 0.48
SDF4-202ENST00000360001 GNG7O60262 68 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 BRI3O95415 125 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 CD5P06127 495 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 OR5G3P0C626 314 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 CFHR3Q02985 330 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 Q56UQ5 140 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 TOR2AQ5JU69 321 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 FAM78BQ5VT40 261 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 ZNF502Q8TBZ5 544 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 NPFFR1Q9GZQ6 430 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 PSG1P11464 419 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 PATE2Q6UY27 113 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 GATAD1Q8WUU5 269 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 TXN2Q99757 166 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 PRSS22Q9GZN4 317 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 ZNF702PQ9H963 129 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 DNAJC4Q9NNZ3 241 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 DOK5Q9P104 306 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 FUT9Q9Y231 359 aa18.06■□□□□ 0.48
SDF4-202ENST00000360001 TRAV30A0A087WSZ9 112 aa18.05■□□□□ 0.48
SDF4-202ENST00000360001 STAG3L2P0CL84 134 aa18.05■□□□□ 0.48
SDF4-202ENST00000360001 STAG3L3P0CL85 134 aa18.05■□□□□ 0.48
SDF4-202ENST00000360001 RBMS3Q6XE24 437 aaKnown RBP18.05■□□□□ 0.48
SDF4-202ENST00000360001 MIR17HGQ75NE6 70 aa18.05■□□□□ 0.48
SDF4-202ENST00000360001 TMPRSS5Q9H3S3 457 aa18.05■□□□□ 0.48
SDF4-202ENST00000360001 H3BUA1 57 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 OR1L4Q8NGR5 311 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 PBDC1Q9BVG4 233 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 EIF5A2Q9GZV4 153 aaKnown RBP18.04■□□□□ 0.48
SDF4-202ENST00000360001 GNG13Q9P2W3 67 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 MTORP42345 2549 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 RBFOX3A6NFN3 312 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 OR2T8A6NH00 312 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 C9JQL5 133 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 COX7A2P2O60397 106 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 IGLV1-40P01703 118 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 TRGV3P03979 118 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 PLP1P60201 277 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 PFDN5Q99471 154 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 RARRES2Q99969 163 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 TREM1Q9NP99 234 aa18.04■□□□□ 0.48
SDF4-202ENST00000360001 DNAJC9-AS1A6NH13 148 aa18.03■□□□□ 0.48
SDF4-202ENST00000360001 FAM223BA6NKX1 122 aa18.03■□□□□ 0.48
SDF4-202ENST00000360001 RD3LP0DJH9 198 aa18.03■□□□□ 0.48
SDF4-202ENST00000360001 PMS2P11Q13670 270 aa18.03■□□□□ 0.48
SDF4-202ENST00000360001 HAGHQ16775 308 aa18.03■□□□□ 0.48
SDF4-202ENST00000360001 FAM223AQ8IWN6 122 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms