RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PAM16Q9Y3D7 125 aa11.19□□□□□ -0.62
CSNK1E-201ENST00000359867 IGHV4-61A0A0C4DH41 118 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 ABCA2Q9BZC7 2435 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 SRRM4A7MD48 611 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 NPPCP23582 126 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 PRRX1P54821 245 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 FLYWCH2Q96CP2 140 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 PRRC2AP48634 2157 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-201ENST00000359867 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 NUPR1O60356 82 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 MC5RP33032 325 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 ATP5IP56385 69 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 Q5PR19 223 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 FAM78BQ5VT40 261 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 OR4C13Q8NGP0 309 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 OR4A5Q8NH83 315 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 WNK2Q9Y3S1 2297 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 MPDU1O75352 247 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 CD1BP29016 333 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 LMO4P61968 165 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 UBE2V1Q13404 147 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 LHFPL4Q7Z7J7 247 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 ZNF709Q8N972 641 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 LY6G5BQ8NDX9 201 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 NPCDR1Q9BY65 106 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 WDR83OSQ9Y284 106 aa11.17□□□□□ -0.62
CSNK1E-201ENST00000359867 PRSS46E5RG02 174 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 NDUFS8O00217 210 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 ATP5G3P48201 142 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 C22orf46C9J442 243 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 RRHO14718 337 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 OR5G3P0C626 314 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 ZANQ9Y493 2812 aa11.16□□□□□ -0.62
CSNK1E-201ENST00000359867 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 IGHV2-26A0A0B4J1V2 119 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 A0A0U1RQK1 487 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 ZFP36P26651 326 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 LCN2P80188 198 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 S100A7AQ86SG5 101 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 MAPK1IP1LQ8NDC0 245 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 MBD6Q96DN6 1003 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 CLEC7AQ9BXN2 247 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 LIPFP07098 398 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 USF1P22415 310 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 NPY1RP25929 384 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 REG1BP48304 166 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 HLA-DRB5Q30154 266 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 KRTAP1-3Q8IUG1 177 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 ORAOV1Q8WV07 137 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
CSNK1E-201ENST00000359867 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 DLX1P56177 255 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 ITPR3Q14573 2671 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 FNDC10F2Z333 226 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 GNB1P62873 340 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 PRB3Q04118 309 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 DIAPH2-AS1Q14236 149 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 RNF2Q99496 336 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 CELSR1Q9NYQ6 3014 aa11.14□□□□□ -0.63
CSNK1E-201ENST00000359867 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 NDUFB4O95168 129 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 LGALS7P47929 136 aa11.13□□□□□ -0.63
CSNK1E-201ENST00000359867 DSCR9P59020 149 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms