RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 FAM74A3Q4VXF1 159 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 MIC13Q5XKP0 118 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 CTRB2Q6GPI1 263 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 PQLC2Q6ZP29 291 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 IQCF2Q8IXL9 164 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 OR4X1Q8NH49 305 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 OR5R1Q8NH85 324 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 TXN2Q99757 166 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 SLC25A33Q9BSK2 321 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 SLC25A22Q9H936 323 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 TNFRSF19Q9NS68 423 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC4-201ENST00000359005 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 A0A1B0GV50 99 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 E7EUB6 86 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 FCN1O00602 326 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 HMGB3O15347 200 aaKnown RBP8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 PDE6DO43924 150 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 REG1AP05451 166 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 AREGP15514 252 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 RND2P52198 227 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 HAGHQ16775 308 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 KRTAP24-1Q3LI83 254 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 DYNAPQ8N1N2 210 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 SGMS2Q8NHU3 365 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 NPIPB3Q92617 1050 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 ZNF48Q96MX3 618 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 SSX3Q99909 188 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 NIPSNAP3BQ9BS92 247 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 DNAJC4Q9NNZ3 241 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
TRAPPC4-201ENST00000359005 F6UZH7 168 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 AVPP01185 164 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 LINC00869P0C866 280 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 STAG3L2P0CL84 134 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 STAG3L3P0CL85 134 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 CD24P25063 80 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 MFAP4P55083 255 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 MEF2BQ02080 365 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 SCGB2A2Q13296 93 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 AKIRIN2Q53H80 203 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 C10orf113Q5VZT2 155 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 Q8N9W7 124 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 OR2T6Q8NHC8 308 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 SPATA3Q8NHX4 192 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 FAM110DQ8TAY7 271 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 UHRF2Q96PU4 802 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 TMEM231Q9H6L2 316 aa8.51□□□□□ -1.05
TRAPPC4-201ENST00000359005 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 GNG7O60262 68 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 YIF1AO95070 293 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 OR5G3P0C626 314 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 C8orf88P0DMB2 117 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 PNRC1Q12796 327 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 FAM209BQ5JX69 171 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 RXFP4Q8TDU9 374 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 AJUBAQ96IF1 538 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
TRAPPC4-201ENST00000359005 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 IGHV7-81A0A0B4J1V7 117 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 B4DEV8 164 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 H3BUA1 57 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 I3L2K1 104 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 HYPMO75409 117 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 SRD5A1P18405 259 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 FGF8P55075 233 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 CCL20P78556 96 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 ICAM4Q14773 271 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 RHEBQ15382 184 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 C5orf56Q8N8D9 126 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 Q8WTZ3 238 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 C17orf50Q8WW18 174 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 RPUSD4Q96CM3 377 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 TCEAL7Q9BRU2 100 aa8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-201ENST00000359005 IGLV11-55A0A075B6I3 123 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 M0R036 132 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 RD3LP0DJH9 198 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 APELAP0DMC3 54 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 IGHV4-38-2P0DP08 117 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 FCGR2BP31994 310 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 PLP1P60201 277 aa8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 YPEL3P61236 119 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 SSBP2P81877 361 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-201ENST00000359005 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms