RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TSPAN15O95858 294 aa11.73□□□□□ -0.53
TPM1-206ENST00000358278 HOXD3P31249 432 aaPredicted RBP11.73□□□□□ -0.53
TPM1-206ENST00000358278 S100A11P31949 105 aa11.73□□□□□ -0.53
TPM1-206ENST00000358278 MYCNOSP40205 109 aa11.73□□□□□ -0.53
TPM1-206ENST00000358278 FHL3Q13643 280 aa11.73□□□□□ -0.53
TPM1-206ENST00000358278 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
TPM1-206ENST00000358278 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
TPM1-206ENST00000358278 TRAV30A0A087WSZ9 112 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 OR10J1P30954 320 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 SLURP1P55000 103 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 OR1S2Q8NGQ3 325 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 OR5C1Q8NGR4 320 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 IGHV3-35A0A0C4DH35 117 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 FNDC10F2Z333 226 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 CTSGP08311 255 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 ADMP35318 185 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 TCTE3Q8IZS6 198 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
TPM1-206ENST00000358278 OR2C1O95371 312 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 IGLC1P0CG04 106 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.54
TPM1-206ENST00000358278 CLINT1Q14677 625 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 AQP10Q96PS8 301 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 TMEM147Q9BVK8 224 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.54
TPM1-206ENST00000358278 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 ARPC5O15511 151 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 TIGITQ495A1 244 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 TMEM144Q7Z5S9 345 aa11.7□□□□□ -0.54
TPM1-206ENST00000358278 IGKV1-17P01599 117 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 AP2S1P53680 142 aaPredicted RBP11.69□□□□□ -0.54
TPM1-206ENST00000358278 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 FAM106AQ4KMX7 169 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 TREML4Q6UXN2 200 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 YIF1AO95070 293 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 C1QL4Q86Z23 238 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
TPM1-206ENST00000358278 DLX4Q92988 240 aaPredicted RBP11.69□□□□□ -0.54
TPM1-206ENST00000358278 ZNF320A2RRD8 509 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 FABP1P07148 127 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 CD300CQ08708 224 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 KLF5Q13887 457 aaPredicted RBP11.68□□□□□ -0.54
TPM1-206ENST00000358278 VWC2Q2TAL6 325 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 ZNF600Q6ZNG1 722 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 LINC00482Q8N8I6 264 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 TRGV9Q99603 122 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 ATP5SQ99766 215 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 MFFQ9GZY8 342 aa11.68□□□□□ -0.54
TPM1-206ENST00000358278 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM1-206ENST00000358278 DNHD1Q96M86 4753 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 NDUFA4O00483 81 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 OVOL1O14753 267 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 DFFBO76075 338 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 YPEL3P61236 119 aaPredicted RBP11.67□□□□□ -0.54
TPM1-206ENST00000358278 ZNF90Q03938 601 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 C20orf24Q9BUV8 137 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 FBXL17Q9UF56 701 aa11.67□□□□□ -0.54
TPM1-206ENST00000358278 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 HMSDA8MTL9 139 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 TOMM40O96008 361 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 C1QBP02746 253 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 RD3LP0DJH9 198 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 CD33P20138 364 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 FGF7P21781 194 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 RAB31Q13636 194 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 NEURL2Q9BR09 285 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 PSG1P11464 419 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 ZFP69Q49AA0 526 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 Q8WTZ3 238 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 RCC1LQ96I51 464 aaKnown RBP11.66□□□□□ -0.54
TPM1-206ENST00000358278 PEMTQ9UBM1 199 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 WDR83OSQ9Y284 106 aa11.66□□□□□ -0.54
TPM1-206ENST00000358278 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
TPM1-206ENST00000358278 LGALS9O00182 355 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 PFDN1O60925 122 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 IFNA5P01569 189 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 OR2F1Q13607 317 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 ZNF345Q14585 488 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.54
TPM1-206ENST00000358278 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 287.5 ms