RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 DEFB108AA8MXU0 73 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
CAPN3-205ENST00000357568 ALKBH6Q3KRA9 238 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 SPATA12Q7Z6I5 190 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 ZNF329Q86UD4 541 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 RFESDQ8TAC1 157 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 FAM168AQ92567 244 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 MED13Q9UHV7 2174 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 UPK2O00526 184 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 CELA3AP09093 270 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 PSG1P11464 419 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 PRDX2P32119 198 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 CD69Q07108 199 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 TMEM251Q8N6I4 163 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 CD177Q8N6Q3 437 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 RBMXL3Q8N7X1 1067 aaKnown RBP8.66□□□□□ -1.02
CAPN3-205ENST00000357568 ZNF355PQ9NSJ1 428 aa8.66□□□□□ -1.02
CAPN3-205ENST00000357568 APC2O95996 2303 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 HIGD1CA8MV81 97 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 SMAD7O15105 426 aaKnown RBP8.65□□□□□ -1.02
CAPN3-205ENST00000357568 CGB3P0DN86 165 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 CGB7P0DN87 165 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 MYCNOSP40205 109 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 RPL39P5Q59GN2 51 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 SPINK14Q6IE38 97 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 VKORC1L1Q8N0U8 176 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 STXBP6Q8NFX7 210 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.02
CAPN3-205ENST00000357568 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 ZNF835Q9Y2P0 537 aa8.65□□□□□ -1.02
CAPN3-205ENST00000357568 WDFY3Q8IZQ1 3526 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 IGKV1OR2-108A0A075B7D4 117 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 A8MWL6 223 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 KLRC4-KLRK1H3BQV0 150 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 FAM87AP0C7U9 286 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 IGLC1P0CG04 106 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 MPV17P39210 176 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 MAGEA5P43359 124 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 ZNF826PQ6ZT77 177 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 OR2T6Q8NHC8 308 aa8.65□□□□□ -1.03
CAPN3-205ENST00000357568 C22orf46C9J442 243 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 PSG9Q00887 426 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 KLRB1Q12918 225 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 SSX8Q7RTT4 187 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 RPP21Q9H633 154 aaKnown RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 CLCF1Q9UBD9 225 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 TET2Q6N021 2002 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 NCOR2Q9Y618 2525 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 HCFC1P51610 2035 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 MUC21A0A0G2JKD1 596 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 MUC21A0A140T8X8 626 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 CELA3BP08861 270 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 COX8AP10176 69 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 MUC21Q5SSG8 566 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 MBNL2Q5VZF2 373 aaKnown RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 PAXXQ9BUH6 204 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 SSBP3Q9BWW4 388 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-205ENST00000357568 CLEC5AQ9NY25 188 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 CALYQ9NYX4 217 aa8.64□□□□□ -1.03
CAPN3-205ENST00000357568 SRRM4A7MD48 611 aaKnown RBP8.63□□□□□ -1.03
CAPN3-205ENST00000357568 K7EM74 188 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-205ENST00000357568 GPR183P32249 361 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 C1orf162Q8NEQ5 155 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-205ENST00000357568 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 ACACAQ13085 2346 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 ZNF134P52741 427 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 TPRX1Q8N7U7 411 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 GPR82Q96P67 336 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 LINC00574Q9H8X3 128 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 FREM1Q5H8C1 2179 aa8.63□□□□□ -1.03
CAPN3-205ENST00000357568 CORTO00230 105 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 IGKV3-15P01624 115 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 MEOX1P50221 254 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 LRRC29Q8WV35 223 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 DCTN5Q9BTE1 182 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 LOC102724200A0A096LPH7 203 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-205ENST00000357568 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
CAPN3-205ENST00000357568 H3BRM9 83 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms