RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MIC13Q5XKP0 118 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 SPSB3Q6PJ21 355 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 SFT2D1Q8WV19 159 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 NPFFR1Q9GZQ6 430 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 SLC39A9Q9NUM3 307 aa14.19□□□□□ -0.14
SMARCD3-202ENST00000356800 IGKV1D-37A0A075B6S9 117 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 TRBV9A0A0B4J1U6 114 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 OR2J3O76001 311 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 PPIFP30405 207 aaKnown RBP14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 OR10J1P30954 320 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 SCGB2A2Q13296 93 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 ZNF580Q9UK33 172 aa14.18□□□□□ -0.14
SMARCD3-202ENST00000356800 SEC14L6B5MCN3 397 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 LINC00869P0C866 280 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 OR4X1Q8NH49 305 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 ACTR3CQ9C0K3 210 aaPredicted RBP14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 PRSS22Q9GZN4 317 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 S4R3C0 116 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 CTXND1A0A1B0GTU2 59 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 CFHR3Q02985 330 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 CYP2G1PQ6ZSU1 146 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 BPIFCQ8NFQ6 507 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 THYN1Q9P016 225 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 FBXL7Q9UJT9 491 aa14.17□□□□□ -0.14
SMARCD3-202ENST00000356800 TCRBV4S1A1TA0A5B7 111 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 ANKRD34BA5PLL1 514 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 CLDN34H7C241 214 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 HIST1H1BP16401 226 aaKnown RBP14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 SELENOTP62341 195 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 SSX7Q7RTT5 188 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 FAM210AQ96ND0 272 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 MS4A10Q96PG2 267 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 TRGV9Q99603 122 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 F8P00451 2351 aa14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 FN1P02751 2386 aaKnown RBP14.16□□□□□ -0.14
SMARCD3-202ENST00000356800 NF1P21359 2839 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 FAM181BA6NEQ2 426 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 ZFP92A6NM28 416 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 I3L521 148 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 CCL20P78556 96 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 RHOGP84095 191 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 GCSAMLQ5JQS6 135 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 Q8N2B8 174 aa14.15□□□□□ -0.14
SMARCD3-202ENST00000356800 MAP1LC3B2A6NCE7 125 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 F8W735 103 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 LCN15Q6UWW0 184 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 RAB24Q969Q5 203 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 C19orf24Q9BVV8 132 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 MAP1LC3BQ9GZQ8 125 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 SLC25A22Q9H936 323 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 A0A1B0GV50 99 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 CD5P06127 495 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 GATA2P23769 480 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 CDC34P49427 236 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 HILS1P60008 231 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 ZNF90Q03938 601 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 PMS2P11Q13670 270 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 C15orf32Q32M92 178 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 FAM122CQ6P4D5 195 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 NECAP1Q8NC96 275 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 ZNF418Q8TF45 676 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 PBDC1Q9BVG4 233 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 SCRT1Q9BWW7 348 aa14.14□□□□□ -0.15
SMARCD3-202ENST00000356800 A0A1W2PPV4 95 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 KRBOX1C9JBD0 128 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 CLN5O75503 358 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 BRI3O95415 125 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 IGHV3-23P01764 117 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 IGLC1P0CG04 106 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 SRSF3P84103 164 aaKnown RBP14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 TOR2AQ5JU69 321 aa14.13□□□□□ -0.15
SMARCD3-202ENST00000356800 RNASE1P07998 156 aaKnown RBP14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 MFAP4P55083 255 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 GUK1Q16774 197 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 C10orf99Q6UWK7 81 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 ZNF329Q86UD4 541 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 KLK15Q9H2R5 256 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 C21orf62Q9NYP8 219 aa14.12□□□□□ -0.15
SMARCD3-202ENST00000356800 H3BUA1 57 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 IGKV1-17P01599 117 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 TRGV3P03979 118 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 RHOBP62745 196 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 ZNF502Q8TBZ5 544 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 SMDT1Q9H4I9 107 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 SERTAD4Q9NUC0 356 aa14.11□□□□□ -0.15
SMARCD3-202ENST00000356800 PSMB11A5LHX3 300 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 IGHG4P01861 327 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 ZP3P21754 424 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 FCGR2BP31994 310 aaPredicted RBP14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 NPBWR1P48145 328 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 FGF8P55075 233 aaPredicted RBP14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 PEA15Q15121 130 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 TIGITQ495A1 244 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 LCNL1Q6ZST4 164 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 Q6ZSV7 163 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 GATAD1Q8WUU5 269 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 SEPSECSQ9HD40 501 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms