RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 PPP1R35Q8TAP8 253 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 CORO2AQ92828 525 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 PAXXQ9BUH6 204 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 FNDC4Q9H6D8 234 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-203ENST00000356147 PEX7O00628 323 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 NUDT3O95989 172 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 WT1P19544 449 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-203ENST00000356147 KLF3P57682 345 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-203ENST00000356147 PEAR1Q5VY43 1037 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-203ENST00000356147 PATE2Q6UY27 113 aa8.22□□□□□ -1.09
PTPRA-203ENST00000356147 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 A0A1W2PRE2 83 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 IGLC7A0M8Q6 106 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 OR2T8A6NH00 312 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 CD69Q07108 199 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 OR8B3Q8NGG8 313 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 MBD6Q96DN6 1003 aa8.21□□□□□ -1.09
PTPRA-203ENST00000356147 GSX1Q9H4S2 264 aaPredicted RBP8.21□□□□□ -1.09
PTPRA-203ENST00000356147 SPTBN2O15020 2390 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 TRAV8-1A0A0A6YYK1 113 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
PTPRA-203ENST00000356147 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 SSX8Q7RTT4 187 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF329Q86UD4 541 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 HARBI1Q96MB7 349 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 MRPL20Q9BYC9 149 aaKnown RBP8.21□□□□□ -1.1
PTPRA-203ENST00000356147 COMMD5Q9GZQ3 224 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 PRNDQ9UKY0 176 aa8.21□□□□□ -1.1
PTPRA-203ENST00000356147 PGPA6NDG6 321 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 H0YJW9 148 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 NKX2-8O15522 239 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 CCL3L1P16619 93 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 TNFSF4P23510 183 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 KIR2DS2P43631 304 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 DLX1P56177 255 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 C10orf113Q5VZT2 155 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 IGHV3-72A0A0B4J1Y9 119 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 PSG1P11464 419 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 MUC21Q5SSG8 566 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF596Q8TC21 504 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 MRPS16Q9Y3D3 137 aaKnown RBP8.2□□□□□ -1.1
PTPRA-203ENST00000356147 PIEZO2Q9H5I5 2752 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 A0A087X0K7 114 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 CGB3P0DN86 165 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 CGB7P0DN87 165 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 LDLRAD2Q5SZI1 272 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 LINC00305Q7Z4B0 112 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 RPRMLQ8N4K4 120 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 RBMXL3Q8N7X1 1067 aaKnown RBP8.2□□□□□ -1.1
PTPRA-203ENST00000356147 FER1L6-AS2Q96M78 137 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 ZPBPQ9BS86 351 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
PTPRA-203ENST00000356147 BDP1A6H8Y1 2624 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 DSCAML1Q8TD84 2053 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 C21orf140B9A014 251 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 TMEM178AQ8NBL3 297 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 FDCSPQ8NFU4 85 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 GRAMD2BQ96HH9 432 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 MRPL27Q9P0M9 148 aaKnown RBP8.19□□□□□ -1.1
PTPRA-203ENST00000356147 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 IGHV1-69-2A0A0G2JMI3 117 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 PSMB11A5LHX3 300 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 RTL8BQ17RB0 113 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 C1orf210Q8IVY1 113 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 MUC15Q8N387 334 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
PTPRA-203ENST00000356147 SVEP1Q4LDE5 3571 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 COX19Q49B96 90 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
PTPRA-203ENST00000356147 KLK10O43240 276 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 LEPROTL1O95214 131 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 TOMM40O96008 361 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 CCL8P80075 99 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 C2orf83Q53S99 150 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
PTPRA-203ENST00000356147 FXYD5Q96DB9 178 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 RITA1Q96K30 269 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF835Q9Y2P0 537 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 FAM87AP0C7U9 286 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 MBNL2Q5VZF2 373 aaKnown RBP8.18□□□□□ -1.1
PTPRA-203ENST00000356147 BHLHA15Q7RTS1 189 aaPredicted RBP8.18□□□□□ -1.1
PTPRA-203ENST00000356147 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 TPPP3Q9BW30 176 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF257Q9Y2Q1 563 aa8.18□□□□□ -1.1
PTPRA-203ENST00000356147 SYS1-DBNDD2H3BUS1 97 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 HIST1H1EP10412 219 aaKnown RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 ERHP84090 104 aaKnown RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms