RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 OR1L4Q8NGR5 311 aa20.3■□□□□ 0.84
CLK2-201ENST00000355560 RNF2Q99496 336 aa20.3■□□□□ 0.84
CLK2-201ENST00000355560 RASL11BQ9BPW5 248 aa20.3■□□□□ 0.84
CLK2-201ENST00000355560 PARLQ9H300 379 aa20.3■□□□□ 0.84
CLK2-201ENST00000355560 GSX1Q9H4S2 264 aaPredicted RBP20.3■□□□□ 0.84
CLK2-201ENST00000355560 CELSR1Q9NYQ6 3014 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 K7EIM0 57 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 PDE6DO43924 150 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 OR7C2O60412 319 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 KLF17Q5JT82 389 aaPredicted RBP20.29■□□□□ 0.84
CLK2-201ENST00000355560 MORN5Q5VZ52 161 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 C10orf113Q5VZT2 155 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 PQLC2Q6ZP29 291 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 OR51G1Q8NGK1 321 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 CLN5O75503 358 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 PNRC1Q12796 327 aaPredicted RBP20.29■□□□□ 0.84
CLK2-201ENST00000355560 ZNF503Q96F45 646 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 UHRF2Q96PU4 802 aa20.29■□□□□ 0.84
CLK2-201ENST00000355560 YTHDF2Q9Y5A9 579 aaKnown RBP20.29■□□□□ 0.84
CLK2-201ENST00000355560 C8orf88P0DMB2 117 aa20.28■□□□□ 0.84
CLK2-201ENST00000355560 HSPB9Q9BQS6 159 aa20.28■□□□□ 0.84
CLK2-201ENST00000355560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.28■□□□□ 0.841e-31■■■□□ 19
CLK2-201ENST00000355560 A0A0U1RQK1 487 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 PATE2Q6UY27 113 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 TTC9CQ8N5M4 171 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 TXNDC17Q9BRA2 123 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 SDF2L1Q9HCN8 221 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 IGLC1P0CG04 106 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 ISOC2Q96AB3 205 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 RBM14Q96PK6 669 aaKnown RBP20.27■□□□□ 0.84
CLK2-201ENST00000355560 TMEM167BQ9NRX6 74 aa20.27■□□□□ 0.84
CLK2-201ENST00000355560 A0A096LNT2 108 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 EGR2P11161 476 aaPredicted RBP20.26■□□□□ 0.83
CLK2-201ENST00000355560 NPPCP23582 126 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 SLC25A2Q9BXI2 301 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 ZNF355PQ9NSJ1 428 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 NAT8Q9UHE5 227 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 ATF4P18848 351 aaPredicted RBP20.26■□□□□ 0.83
CLK2-201ENST00000355560 ORM2P19652 201 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 FANCD2OSQ96PS1 177 aa20.26■□□□□ 0.83
CLK2-201ENST00000355560 IGLV11-55A0A075B6I3 123 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 TRAV5A0A0B4J249 113 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 TRAV20A0A0B4J274 112 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 F6UZH7 168 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 OR10J4P0C629 311 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 OR1B1Q8NGR6 318 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 FAM167A-AS1Q96KT0 104 aa20.25■□□□□ 0.83
CLK2-201ENST00000355560 ELOA3CA0A087WX78 387 aaPredicted RBP20.24■□□□□ 0.83
CLK2-201ENST00000355560 OR5AU1Q8NGC0 362 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 TUBA4BQ9H853 241 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 ABCA12Q86UK0 2595 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 GATA3P23771 443 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 TMEM241Q24JQ0 296 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 LINC00305Q7Z4B0 112 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 TMEM219Q86XT9 240 aa20.24■□□□□ 0.83
CLK2-201ENST00000355560 A0A087WWC5 75 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 C15orf54Q8N8G6 183 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 LINC01356Q8N9X3 169 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 OR5T1Q8NG75 326 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 MEGF9Q9H1U4 602 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 ZFHX3Q15911 3703 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 COLCA2A8K830 154 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 B4DEV8 164 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 C5orf56Q8N8D9 126 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 BEX4Q9NWD9 120 aaPredicted RBP20.23■□□□□ 0.83
CLK2-201ENST00000355560 ARL2-SNX15V9GYD0 113 aa20.23■□□□□ 0.83
CLK2-201ENST00000355560 ATP6V0E1O15342 81 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 NDUFB4O95168 129 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 AVPP01185 164 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 DEFB113Q30KQ7 82 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 TIGITQ495A1 244 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 SGMS2Q8NHU3 365 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 PIFOQ8TCI5 191 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 DERL1Q9BUN8 251 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 SOX21Q9Y651 276 aaPredicted RBP20.22■□□□□ 0.83
CLK2-201ENST00000355560 S4R3C0 116 aa20.22■□□□□ 0.83
CLK2-201ENST00000355560 SCO2A0A1W2PP80 73 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 SH2D7A6NKC9 451 aaPredicted RBP20.21■□□□□ 0.83
CLK2-201ENST00000355560 IGKV1-17P01599 117 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 PSG1P11464 419 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 UBE2L3P68036 154 aaKnown RBP20.21■□□□□ 0.83
CLK2-201ENST00000355560 ADIRFQ15847 76 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 MAPK1IP1LQ8NDC0 245 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 OR2C1O95371 312 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 PLA2G2AP14555 144 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 ECSCRQ19T08 205 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 SSX3Q99909 188 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 TMUB1Q9BVT8 246 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 MOB4Q9Y3A3 225 aa20.21■□□□□ 0.83
CLK2-201ENST00000355560 HYPMO75409 117 aa20.2■□□□□ 0.82
CLK2-201ENST00000355560 THYN1Q9P016 225 aa20.2■□□□□ 0.82
CLK2-201ENST00000355560 NAV2Q8IVL1 2488 aa20.2■□□□□ 0.82
CLK2-201ENST00000355560 PLP1P60201 277 aa20.2■□□□□ 0.82
CLK2-201ENST00000355560 DOPEY2Q9Y3R5 2298 aa20.2■□□□□ 0.82
CLK2-201ENST00000355560 PYYP10082 97 aa20.19■□□□□ 0.82
CLK2-201ENST00000355560 LYZP61626 148 aa20.19■□□□□ 0.82
CLK2-201ENST00000355560 RPL23P62829 140 aaKnown RBP20.19■□□□□ 0.82
CLK2-201ENST00000355560 UNQ5815/PRO19632Q6UWF5 114 aa20.19■□□□□ 0.82
CLK2-201ENST00000355560 TENM4Q6N022 2769 aa20.19■□□□□ 0.82
CLK2-201ENST00000355560 RNF223E7ERA6 249 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms