RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 IGHV1-2P23083 117 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TMEM144Q7Z5S9 345 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 PTPRQQ9UMZ3 2332 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A0G2JK05 382 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 CEACAM1P13688 526 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 NPIPB13A6NJU9 1138 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 NPIPB5A8MRT5 1133 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 RPL36AP83881 106 aaKnown RBP4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 SAMD5Q5TGI4 173 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QL2Q7Z5L3 287 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 RPL36ALQ969Q0 106 aaKnown RBP4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 PIN1P1O15428 100 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 LHX2P50458 406 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 SERF1AO75920 110 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TEX43Q6ZNM6 134 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 CELA3BP08861 270 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 RBMY1FQ15415 496 aaKnown RBP4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 RASL10AQ92737 203 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 LAMTOR2Q9Y2Q5 125 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 IGHV3-53P01767 116 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 CSRP2Q16527 193 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TIAF1O95411 115 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QTNF5Q9BXJ0 243 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 UPK2O00526 184 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 YPEL1O60688 119 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 YPEL2Q96QA6 119 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 TMEM133Q9H2Q1 129 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 RFPL3SP0C7P2 107 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 FXYD7P58549 80 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 PLEKHB2Q96CS7 222 aa4.83□□□□□ -1.64
SRGAP1-201ENST00000355086 PAPPAQ13219 1627 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 CELA3AP09093 270 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 FOXL1Q12952 345 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 CD55P08174 381 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 IFI6P09912 130 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ACTL10Q5JWF8 245 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 HAPLN4Q86UW8 402 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 CHCHD1Q96BP2 118 aaKnown RBP4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 PQLC2LA1A4F0 135 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 CTSBP07858 339 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 C1orf122Q6ZSJ8 110 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ATP5L2Q7Z4Y8 100 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ABCA3Q99758 1704 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF831Q5JPB2 1677 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC01549A6NIU2 74 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 NDUFS8O00217 210 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A087WWC5 75 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QCP02747 245 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 SELENOKQ9Y6D0 94 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ERVH48-1M5A8F1 160 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 SPRED2Q7Z698 418 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 TUBGCP6Q96RT7 1819 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 UCP1P25874 307 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 RPL23P62829 140 aaKnown RBP4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 SEC11AP67812 179 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV9-2A0A087WT02 112 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 MPTX1A8MV57 137 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 ESDP10768 282 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 TMEM126AQ9H061 195 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 RAMP1O60894 148 aa4.82□□□□□ -1.64
SRGAP1-201ENST00000355086 PRCDQ00LT1 54 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 Q5BKY6 102 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 C2orf82Q6UX34 121 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 IGKV2-40A0A087WW87 121 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 IGKV2D-40P01614 121 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 ZXDCQ2QGD7 858 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 C1orf159Q96HA4 380 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 WFDC6Q9BQY6 131 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 EREGO14944 169 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SSBP2P81877 361 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 HSD52Q0P140 79 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 GTF3AQ92664 365 aaKnown RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC00527Q9UJ94 153 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 A8MXK9 166 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 CD5P06127 495 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 DSCR9P59020 149 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 CD200R1LQ6Q8B3 271 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 DEFB104AQ8WTQ1 72 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 PYYP10082 97 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 PDCD11Q14690 1871 aaKnown RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 ZCCHC24Q8N2G6 241 aaKnown RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SP7Q8TDD2 431 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 RAMP3O60896 148 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF525Q8N782 197 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 OSTCQ9NRP0 149 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 PKD1L3Q7Z443 1732 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 NR2C2APQ86WQ0 139 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms