RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF296Q8WUU4 475 aaPredicted RBP10.78□□□□□ -0.68
IFT88-202ENST00000351808 CHCHD2Q9Y6H1 151 aaPredicted RBP10.78□□□□□ -0.68
IFT88-202ENST00000351808 PEX7O00628 323 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 MT-ATP8P03928 68 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 C8orf88P0DMB2 117 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 GABRG2P18507 467 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 DUTP33316 252 aaKnown RBP10.77□□□□□ -0.69
IFT88-202ENST00000351808 CSN1S1P47710 185 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 GNG5P63218 68 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 HES3Q5TGS1 186 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 IGKV1OR2-108A0A075B7D4 117 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 FAM106CPP0CH98 169 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 CACNG7P62955 275 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 FAM106AQ4KMX7 169 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 SLC25A33Q9BSK2 321 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 CHRNA10Q9GZZ6 450 aa10.77□□□□□ -0.69
IFT88-202ENST00000351808 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
IFT88-202ENST00000351808 PSPNO60542 156 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 PYYP10082 97 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 ACP1P24666 158 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
IFT88-202ENST00000351808 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
IFT88-202ENST00000351808 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 OBP2AQ9NY56 170 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 TNCP24821 2201 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 DDB2Q92466 427 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 RPP21Q9H633 154 aaKnown RBP10.76□□□□□ -0.69
IFT88-202ENST00000351808 FGF21Q9NSA1 209 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 ERG28Q9UKR5 140 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 REV3LO60673 3130 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 CHD9Q3L8U1 2897 aa10.76□□□□□ -0.69
IFT88-202ENST00000351808 CT45A6P0DMU7 189 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CT45A5P0DMU8 189 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CT45A7P0DMV0 189 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
IFT88-202ENST00000351808 GPR12P47775 334 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 DEFB133Q30KQ1 61 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CT45A1Q5HYN5 189 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 PRSS3P2Q8NHM4 247 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CT45A3Q8NHU0 189 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 DEFB126Q9BYW3 111 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CYSLTR1Q9Y271 337 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 ADAMTS20P59510 1910 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 J3QT63 122 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 PROP1O75360 226 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 SP1P08047 785 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 LOXL1Q08397 574 aaPredicted RBP10.75□□□□□ -0.69
IFT88-202ENST00000351808 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CDIP1Q9H305 208 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 B5MCH6 92 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 MYOD1P15172 320 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 FXYD7P58549 80 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 CFHR1Q03591 330 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 MLANAQ16655 118 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 TTC9CQ8N5M4 171 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 GPR82Q96P67 336 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 LINC00312Q9Y6C7 94 aa10.75□□□□□ -0.69
IFT88-202ENST00000351808 LTBP2Q14767 1821 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 E9PLD3 99 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 CXCL13O43927 109 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 LTAP01374 205 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 ERVK-16P61578 105 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 HOXA4Q00056 320 aaPredicted RBP10.74□□□□□ -0.69
IFT88-202ENST00000351808 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 SLC25A2Q9BXI2 301 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 PKIBQ9C010 78 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 TMEM30CPA0ZSE6 113 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 DKK1O94907 266 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 TFF1P04155 84 aa10.74□□□□□ -0.69
IFT88-202ENST00000351808 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
IFT88-202ENST00000351808 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 A0A096LNJ9 63 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 ZNF503-AS2A6NEH8 195 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 VSTM5A8MXK1 200 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 IGLL5B9A064 214 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 P01737 135 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 CCL3P10147 92 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 C3AR1Q16581 482 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 LGALS9BQ3B8N2 356 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 OR9G1Q8NH87 305 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 CEP290O15078 2479 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 FRYQ5TBA9 3013 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 TCRBV4S1A1TA0A5B7 111 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 LIFP15018 202 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 DSCR4P56555 118 aaPredicted RBP10.73□□□□□ -0.69
IFT88-202ENST00000351808 GAGE5Q13069 117 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 GAGE6Q13070 117 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 WDR86Q86TI4 376 aa10.73□□□□□ -0.69
IFT88-202ENST00000351808 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
IFT88-202ENST00000351808 OOEPA6NGQ2 149 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms