RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OR8B2Q96RD0 313 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
TRIM4-201ENST00000349062 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 LCN2P80188 198 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 TMEM155Q4W5P6 130 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 SP5Q6BEB4 398 aaPredicted RBP11.22□□□□□ -0.61
TRIM4-201ENST00000349062 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 BLNKQ8WV28 456 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 C22orf46C9J442 243 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 F2Z2F3 143 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 FCN1O00602 326 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 DLEU1O43261 78 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
TRIM4-201ENST00000349062 CORO2AQ92828 525 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 NCBP2LA6PVI3 153 aaKnown RBP11.22□□□□□ -0.61
TRIM4-201ENST00000349062 SERF1AO75920 110 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 NTF3P20783 257 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 MMDQ15546 238 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
TRIM4-201ENST00000349062 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
TRIM4-201ENST00000349062 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
TRIM4-201ENST00000349062 A0A1W2PPR1 153 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 BTF3P20290 206 aaKnown RBP11.21□□□□□ -0.61
TRIM4-201ENST00000349062 ZNF833PQ6ZTB9 187 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 Q8N7P7 452 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 TIMD4Q96H15 378 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 C1orf159Q96HA4 380 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 TXN2Q99757 166 aa11.21□□□□□ -0.61
TRIM4-201ENST00000349062 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.61
TRIM4-201ENST00000349062 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.62
TRIM4-201ENST00000349062 MORN5Q5VZ52 161 aa11.21□□□□□ -0.62
TRIM4-201ENST00000349062 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.62
TRIM4-201ENST00000349062 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.62
TRIM4-201ENST00000349062 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.62
TRIM4-201ENST00000349062 LINC00869P0C866 280 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 PYYP10082 97 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 TPPP2P59282 170 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 RHOBP62745 196 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 RUSC1-AS1Q66K80 236 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 C11orf42Q8N5U0 333 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 MGST1P10620 155 aaKnown RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 Q6ZVH6 145 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 OR1B1Q8NGR6 318 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 CLEC7AQ9BXN2 247 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 SERTAD4Q9NUC0 356 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 CBY1Q9Y3M2 126 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 GGCTO75223 188 aaKnown RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 GCHFRP30047 84 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 PRRX1P54821 245 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 Q6ZWC4 215 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 OR52E5Q8NH55 327 aa11.2□□□□□ -0.62
TRIM4-201ENST00000349062 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
TRIM4-201ENST00000349062 VPS13CQ709C8 3753 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 TIMM23O14925 209 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 CRYBB3P26998 211 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 ERASQ7Z444 233 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 SIGLECL1Q8N7X8 197 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 OR5AU1Q8NGC0 362 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 RAB1CQ92928 201 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
TRIM4-201ENST00000349062 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
TRIM4-201ENST00000349062 OR10G8Q8NGN5 311 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
TRIM4-201ENST00000349062 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 IGHV3-23P01764 117 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 RAB4AP20338 218 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 USF1P22415 310 aaPredicted RBP11.19□□□□□ -0.62
TRIM4-201ENST00000349062 OCC1Q8TAD7 63 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
TRIM4-201ENST00000349062 CXorf1O96002 111 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 RBP4P02753 201 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 AMTP48728 403 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 SH2D7A6NKC9 451 aaPredicted RBP11.18□□□□□ -0.62
TRIM4-201ENST00000349062 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 SFTPCP11686 197 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
TRIM4-201ENST00000349062 TMEM183BQ1AE95 376 aa11.18□□□□□ -0.62
TRIM4-201ENST00000349062 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms