RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 A0A1B0GUS0 222 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 IL4P05112 153 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 KRTAP27-1Q3LI81 207 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 ATP5L2Q7Z4Y8 100 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 SLC25A33Q9BSK2 321 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 Q9UFV3 132 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 ACACAQ13085 2346 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 GVINP1Q7Z2Y8 2422 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 FABP2P12104 132 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 LMO1P25800 156 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 C3orf36Q3SXR2 165 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 ZNF788Q6ZQV5 615 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 SELLP14151 372 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 C2orf16Q68DN1 1984 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 ERVK11-1P61568 191 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 THBDP07204 575 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 NIT1Q86X76 327 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
NUP50-201ENST00000347635 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 A0A1B0GW15 77 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 MYOD1P15172 320 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 GPX1P07203 203 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 PNKDQ8N490 385 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 RTTNQ86VV8 2226 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 ZNF207O43670 478 aaKnown RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 RPL7P18124 248 aaKnown RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 RELQ04864 619 aaPredicted RBP12.09□□□□□ -0.47
NUP50-201ENST00000347635 Q0VG73 95 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 SNHG12Q9BXW3 62 aa12.09□□□□□ -0.47
NUP50-201ENST00000347635 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
NUP50-201ENST00000347635 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 FNDC10F2Z333 226 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 SCGB1C2P0DMR2 95 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 J3KRW8 73 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 LINC00614P0C842 121 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 SH2D7A6NKC9 451 aaPredicted RBP12.08□□□□□ -0.48
NUP50-201ENST00000347635 F5H697 171 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 LYRM7Q5U5X0 104 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 Q6AWC8 147 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
NUP50-201ENST00000347635 SAPCD1Q5SSQ6 148 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 SCGB1D4Q6XE38 83 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 A1L4Q6 167 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 CDKN1AP38936 164 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 GNLYP22749 145 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 GCSHP23434 173 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 TMEM78Q5T7P6 136 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 ZNF414Q96IQ9 312 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 Q1RN00 199 aa12.07□□□□□ -0.48
NUP50-201ENST00000347635 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
NUP50-201ENST00000347635 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
NUP50-201ENST00000347635 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
NUP50-201ENST00000347635 YPEL3P61236 119 aaPredicted RBP12.06□□□□□ -0.48
NUP50-201ENST00000347635 MRPL27Q9P0M9 148 aaKnown RBP12.06□□□□□ -0.48
NUP50-201ENST00000347635 SNAI2O43623 268 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 IGKV3-15P01624 115 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 FBLN7Q53RD9 439 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 TMEM208Q9BTX3 173 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 CIARTQ8N365 385 aaPredicted RBP12.06□□□□□ -0.48
NUP50-201ENST00000347635 MGPP08493 103 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
NUP50-201ENST00000347635 ZNF841Q6ZN19 808 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
NUP50-201ENST00000347635 PLP1P60201 277 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 EFNA4P52798 201 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 HERVK_113P61574 105 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 ST20Q9HBF5 79 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
NUP50-201ENST00000347635 TNFRSF14Q92956 283 aa12.05□□□□□ -0.48
NUP50-201ENST00000347635 A0A1W2PS18 150 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
NUP50-201ENST00000347635 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
NUP50-201ENST00000347635 GPR183P32249 361 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 UNQ5815/PRO19632Q6UWF5 114 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 ERASQ7Z444 233 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 SPTBN2O15020 2390 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 WNT2P09544 360 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 Q6ZWC4 215 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 C11orf1Q9H5F2 150 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 ZNF474Q6S9Z5 364 aaPredicted RBP12.04□□□□□ -0.48
NUP50-201ENST00000347635 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
NUP50-201ENST00000347635 C8orf46Q8TAG6 207 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms