RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RAB24Q969Q5 203 aa8.59□□□□□ -1.03
ECM1-201ENST00000346569 ACTR3CQ9C0K3 210 aaPredicted RBP8.59□□□□□ -1.03
ECM1-201ENST00000346569 YAE1D1Q9NRH1 226 aa8.59□□□□□ -1.03
ECM1-201ENST00000346569 THYN1Q9P016 225 aa8.59□□□□□ -1.03
ECM1-201ENST00000346569 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
ECM1-201ENST00000346569 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
ECM1-201ENST00000346569 ACANP16112 2415 aa8.59□□□□□ -1.04
ECM1-201ENST00000346569 TRAV41A0A0B4J266 112 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
ECM1-201ENST00000346569 HOXA3O43365 443 aaPredicted RBP8.58□□□□□ -1.04
ECM1-201ENST00000346569 IGKV1-17P01599 117 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 HBE1P02100 147 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 CD5P06127 495 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 MFAP4P55083 255 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 RIPPLY3P57055 190 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
ECM1-201ENST00000346569 ECSCRQ19T08 205 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 C9orf152Q5JTZ5 239 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 UQCC3Q6UW78 93 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 LCN15Q6UWW0 184 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 SIGLECL1Q8N7X8 197 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 VN1R17PQ8TDU5 208 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 FAM210AQ96ND0 272 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 C19orf24Q9BVV8 132 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
ECM1-201ENST00000346569 TNFRSF19Q9NS68 423 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 TLN2Q9Y4G6 2542 aa8.58□□□□□ -1.04
ECM1-201ENST00000346569 ANKRD34BA5PLL1 514 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 ZFP92A6NM28 416 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 OR2J3O76001 311 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 PLP1P60201 277 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 FAM122CQ6P4D5 195 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 PATE2Q6UY27 113 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 TMEM86BQ8N661 226 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 TXN2Q99757 166 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 LINC00527Q9UJ94 153 aa8.57□□□□□ -1.04
ECM1-201ENST00000346569 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 MAP1LC3B2A6NCE7 125 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 AP4M1O00189 453 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
ECM1-201ENST00000346569 OR5G3P0C626 314 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 SRP14P37108 136 aaKnown RBP8.56□□□□□ -1.04
ECM1-201ENST00000346569 NPBWR1P48145 328 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 CDC34P49427 236 aaPredicted RBP8.56□□□□□ -1.04
ECM1-201ENST00000346569 CFHR3Q02985 330 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 NECAP1Q8NC96 275 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 GATAD1Q8WUU5 269 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 NOL4LQ96MY1 436 aaPredicted RBP8.56□□□□□ -1.04
ECM1-201ENST00000346569 MAP1LC3BQ9GZQ8 125 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 SLC25A22Q9H936 323 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
ECM1-201ENST00000346569 DNAJC4Q9NNZ3 241 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 C21orf62Q9NYP8 219 aa8.56□□□□□ -1.04
ECM1-201ENST00000346569 A0A1B0GV50 99 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 A0A1W2PPV4 95 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 RBFOX3A6NFN3 312 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 C9JQL5 133 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 H3BUA1 57 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 LY6G6DO95868 133 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 CTSGP08311 255 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 PSG1P11464 419 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
ECM1-201ENST00000346569 YPEL3P61236 119 aaPredicted RBP8.55□□□□□ -1.04
ECM1-201ENST00000346569 RHOBP62745 196 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 RHOGP84095 191 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 GUK1Q16774 197 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 TIGITQ495A1 244 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 SPATA31B1PQ5VZV4 182 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 ZNF502Q8TBZ5 544 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 SMR3AQ99954 134 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 TMPRSS5Q9H3S3 457 aa8.55□□□□□ -1.04
ECM1-201ENST00000346569 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
ECM1-201ENST00000346569 I3L521 148 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
ECM1-201ENST00000346569 FAM78BQ5VT40 261 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 Q8N2B8 174 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 ZNF414Q96IQ9 312 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 MS4A10Q96PG2 267 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 ATP6V0BQ99437 205 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 RNF2Q99496 336 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 RARRES2Q99969 163 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 PRSS22Q9GZN4 317 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 SMDT1Q9H4I9 107 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 ZNF355PQ9NSJ1 428 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
ECM1-201ENST00000346569 FUT9Q9Y231 359 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 S4R3C0 116 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 SONP18583 2426 aaKnown RBP8.54□□□□□ -1.04
ECM1-201ENST00000346569 ELOA3CA0A087WX78 387 aaPredicted RBP8.54□□□□□ -1.04
ECM1-201ENST00000346569 WI2-2373I1.2A0A1W2PRP0 233 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 KRBOX1C9JBD0 128 aa8.54□□□□□ -1.04
ECM1-201ENST00000346569 GNG7O60262 68 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms