RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TMEM200BQ69YZ2 307 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 TMEM170AQ8WVE7 144 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 RNF166Q96A37 237 aaPredicted RBP19.09■□□□□ 0.65
NPAS3-201ENST00000346562 IGHV1-3A0A0C4DH29 117 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 SERF1AO75920 110 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 RPUSD1Q9UJJ7 312 aaKnown RBP19.09■□□□□ 0.65
NPAS3-201ENST00000346562 TMEM219Q86XT9 240 aa19.09■□□□□ 0.65
NPAS3-201ENST00000346562 IFITM2Q01629 132 aa19.08■□□□□ 0.65
NPAS3-201ENST00000346562 ATP5L2Q7Z4Y8 100 aa19.08■□□□□ 0.65
NPAS3-201ENST00000346562 COL4A1P02462 1669 aa19.08■□□□□ 0.65
NPAS3-201ENST00000346562 FLVCR1-AS1Q8TAF5 88 aa19.08■□□□□ 0.65
NPAS3-201ENST00000346562 IGKV1-9A0A0C4DH69 117 aa19.08■□□□□ 0.64
NPAS3-201ENST00000346562 TSKUQ8WUA8 353 aa19.08■□□□□ 0.64
NPAS3-201ENST00000346562 TMEM178BH3BS89 294 aa19.08■□□□□ 0.64
NPAS3-201ENST00000346562 C1QTNF9P0C862 333 aa19.08■□□□□ 0.64
NPAS3-201ENST00000346562 RPL36AP83881 106 aaKnown RBP19.08■□□□□ 0.64
NPAS3-201ENST00000346562 RPL36ALQ969Q0 106 aaKnown RBP19.08■□□□□ 0.64
NPAS3-201ENST00000346562 LAGE3Q14657 143 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 SLC25A16P16260 332 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 UNQ6494/PRO21346Q6UXR6 183 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 C1QTNF4Q9BXJ3 329 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 JPT2Q9H910 190 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 RNF114Q9Y508 228 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 SRRM5B3KS81 715 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 CD55P08174 381 aa19.07■□□□□ 0.64
NPAS3-201ENST00000346562 LINC01559Q495D7 138 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 GNB1LQ9BYB4 327 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 CRYGSP22914 178 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 KLRD1Q13241 179 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 ST6GALNAC3Q8NDV1 305 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 MBD3L1Q8WWY6 194 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 TMEM8BA6NDV4 472 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 NHP2Q9NX24 153 aaKnown RBP19.06■□□□□ 0.64
NPAS3-201ENST00000346562 HEPN1Q6WQI6 88 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 OR10W1Q8NGF6 305 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 TRGV1A0A0A0MS02 117 aa19.06■□□□□ 0.64
NPAS3-201ENST00000346562 FAM223BA6NKX1 122 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 H3BUT2 72 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 FAM223AQ8IWN6 122 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 SMPXQ9UHP9 88 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 POLR2AP24928 1970 aaKnown RBP19.05■□□□□ 0.64
NPAS3-201ENST00000346562 IGKV2-40A0A087WW87 121 aaPredicted RBP19.05■□□□□ 0.64
NPAS3-201ENST00000346562 IGKV2D-40P01614 121 aaPredicted RBP19.05■□□□□ 0.64
NPAS3-201ENST00000346562 RPL35AP18077 110 aaKnown RBP19.05■□□□□ 0.64
NPAS3-201ENST00000346562 TRAV8-4A0A0B4J246 113 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 M0R2P5 195 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 USMG5Q96IX5 58 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 H3BUX3 64 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 TEX38Q6PEX7 206 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 C9orf139Q6ZV77 190 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 LINC01356Q8N9X3 169 aa19.05■□□□□ 0.64
NPAS3-201ENST00000346562 NAPSAO96009 420 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 INSP01308 110 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 ATXN8Q156A1 80 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 MPZP25189 248 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 RPL15P61313 204 aaKnown RBP19.04■□□□□ 0.64
NPAS3-201ENST00000346562 FGFBP3Q8TAT2 258 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 WDR83OSQ9Y284 106 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 F8WEM9 126 aa19.04■□□□□ 0.64
NPAS3-201ENST00000346562 A0A1B0GWJ7 208 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 TMEM238C9JI98 176 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 GGNQ86UU5 652 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 SRSF6Q13247 344 aaKnown RBP19.03■□□□□ 0.64
NPAS3-201ENST00000346562 SLC25A39Q9BZJ4 359 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-201ENST00000346562 NUP214P35658 2090 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-201ENST00000346562 RASL10AQ92737 203 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 RNF126Q9BV68 326 aa19.03■□□□□ 0.64
NPAS3-201ENST00000346562 TOMM40O96008 361 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 IGHV3-64A0A075B6Q5 118 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 NPIPB5A8MRT5 1133 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 ID3Q02535 119 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 ANKRD36A6QL64 1941 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 KNL1Q8NG31 2342 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 LYPD3O95274 346 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 ACTL10Q5JWF8 245 aa19.02■□□□□ 0.64
NPAS3-201ENST00000346562 SLC25A48Q6ZT89 311 aaKnown RBP19.02■□□□□ 0.64
NPAS3-201ENST00000346562 KLHL30-AS1Q8NEE0 82 aa19.02■□□□□ 0.63
NPAS3-201ENST00000346562 TRAV5A0A0B4J249 113 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 TRGV9Q99603 122 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 PIP4P2Q8N4L2 257 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 IGHV3-73A0A0B4J1V6 119 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 A0A0G2JNJ9 132 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 Q9UFV3 132 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 CASP8AP2Q9UKL3 1982 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 TRAV9-2A0A087WT02 112 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 SPAG8Q99932 426 aaPredicted RBP19.01■□□□□ 0.63
NPAS3-201ENST00000346562 DERL1Q9BUN8 251 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 CLDN16Q9Y5I7 305 aa19.01■□□□□ 0.63
NPAS3-201ENST00000346562 A8MXK9 166 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 TREML4Q6UXN2 200 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 TEX43Q6ZNM6 134 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 LINC00477Q96M19 166 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 OCC1Q8TAD7 63 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 PSG1P11464 419 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 CD300EQ496F6 205 aaPredicted RBP19■□□□□ 0.63
NPAS3-201ENST00000346562 PLEKHB2Q96CS7 222 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 A0A0A6YYD4 124 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 ZNF138P52744 262 aa19■□□□□ 0.63
NPAS3-201ENST00000346562 ZNF876PQ49A33 203 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms