RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PSMB11A5LHX3 300 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 NPPCP23582 126 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
COL12A1-202ENST00000345356 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
COL12A1-202ENST00000345356 SVILO95425 2214 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 UBR3Q6ZT12 1888 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3-66A0A0C4DH42 116 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 FAM90A9PA6NNJ1 464 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 COX6A1P12074 109 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 ETDBQ3ZM63 59 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 ZNF581Q9P0T4 197 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 MMP23AO75900 390 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 PRB4P10163 310 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-202ENST00000345356 C16orf97H3BN30 126 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-202ENST00000345356 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 CFPP27918 469 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 SRSF6Q13247 344 aaKnown RBP10.04□□□□□ -0.8
COL12A1-202ENST00000345356 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
COL12A1-202ENST00000345356 RFPL3SP0C7P2 107 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 FBXL15Q9H469 300 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 MORN2Q502X0 79 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 Q6ZRM9 215 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 YPEL1O60688 119 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 TNFRSF6BO95407 300 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 NRN1LQ496H8 165 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 LCNL1Q6ZST4 164 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 FAM201AQ5SY85 155 aa10.03□□□□□ -0.8
COL12A1-202ENST00000345356 C5orf63A6NC05 138 aa10.02□□□□□ -0.8
COL12A1-202ENST00000345356 TFF1P04155 84 aa10.02□□□□□ -0.8
COL12A1-202ENST00000345356 NTF4P34130 210 aa10.02□□□□□ -0.8
COL12A1-202ENST00000345356 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 A0A0G2JMZ2 1700 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 LRRC37A2A6NM11 1700 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 PAPPA2Q9BXP8 1791 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 PSG7Q13046 419 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 ATXN8Q156A1 80 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 ZNF726P1Q15940 193 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 LAGE3Q14657 143 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 RTTNQ86VV8 2226 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 CSRP2Q16527 193 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 KLF12Q9Y4X4 402 aa10.02□□□□□ -0.81
COL12A1-202ENST00000345356 CRYGSP22914 178 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 CSTL1Q9H114 145 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 NPFFO15130 113 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 CEACAM4O75871 244 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 TIAF1O95411 115 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 PLNP26678 52 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 FAM216BQ8N7L0 139 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 ASCL2Q99929 193 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 EDA2RQ9HAV5 297 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 RBBP6Q7Z6E9 1792 aaKnown RBP10.01□□□□□ -0.81
COL12A1-202ENST00000345356 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
COL12A1-202ENST00000345356 PRR33A8MZF0 331 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 IFI27P40305 119 aaPredicted RBP10□□□□□ -0.81
COL12A1-202ENST00000345356 ZNF831Q5JPB2 1677 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 MYOFQ9NZM1 2061 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 GREB1LQ9C091 1923 aaPredicted RBP10□□□□□ -0.81
COL12A1-202ENST00000345356 PF4V1P10720 104 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 UBALD2Q8IYN6 164 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 RNF182Q8N6D2 247 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 F8W1H4 67 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 TM4SF5O14894 197 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 KLK10O43240 276 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 TMPRSS3P57727 454 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 SLC25A45Q8N413 288 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 KLHDC3Q9BQ90 382 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 A0A1W2PPM0 123 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 C15orf62A8K5M9 175 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 TCRAP04437 139 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 FHL1Q13642 323 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 CYYR1Q96J86 154 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 SPANXA1Q9NS26 97 aa10□□□□□ -0.81
COL12A1-202ENST00000345356 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 CDX4O14627 284 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-202ENST00000345356 FOXF2Q12947 444 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 LYPD6BQ8NI32 183 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 LINC00479Q96M42 142 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 IGHV2-70DA0A0C4DH43 119 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 IGLC7A0M8Q6 106 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms