RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PPIAL4CA0A0B4J2A2 164 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 NUPR1O60356 82 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 PPIAL4GP0DN37 164 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 LGALS7P47929 136 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 ZNF841Q6ZN19 808 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 SERTAD4Q9NUC0 356 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 IGHV1-3A0A0C4DH29 117 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 C22orf46C9J442 243 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 PRRX1P54821 245 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 BPIFB3P59826 476 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 CLEC7AQ9BXN2 247 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
VIPAS39-202ENST00000343765 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 CA7P43166 264 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 ZNF672Q499Z4 452 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 GBGT1Q8N5D6 347 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 OR1L4Q8NGR5 311 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 MRPL18Q9H0U6 180 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 FBXL15Q9H469 300 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 CHODLQ9H9P2 273 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 TNFRSF19Q9NS68 423 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 FCN1O00602 326 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 RPEQ96AT9 228 aa11.94□□□□□ -0.5
VIPAS39-202ENST00000343765 SIGLEC9Q9Y336 463 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 WNK2Q9Y3S1 2297 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 SNURFLB1AK76 121 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 PLGLAQ15195 96 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 UNQ6494/PRO21346Q6UXR6 183 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 TEX45Q8NA69 505 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 THAP8Q8NA92 274 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 RNF2Q99496 336 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 RPH3ALQ9UNE2 315 aa11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 AMMECR1Q9Y4X0 333 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-202ENST00000343765 H3BTX0 84 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 YPEL3P61236 119 aaPredicted RBP11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 RANP62826 216 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 GNG5P63218 68 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 DEFA6Q01524 100 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 OR5R1Q8NH85 324 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
VIPAS39-202ENST00000343765 TSTD3H0UI37 97 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 PKIAP61925 76 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 SELENOTP62341 195 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 CACNA1BQ00975 2339 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 RAB4BP61018 213 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 PRR27Q6MZM9 219 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 ZNF329Q86UD4 541 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 OR8B3Q8NGG8 313 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 OR8B2Q96RD0 313 aa11.91□□□□□ -0.5
VIPAS39-202ENST00000343765 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 GCGP01275 180 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 CD24P25063 80 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 ARF6P62330 175 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 C22orf15Q8WYQ4 148 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 TNFRSF14Q92956 283 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 F2Z2F3 143 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 PEX7O00628 323 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 FSTL3O95633 263 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 CRYGBP07316 175 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 CRISP2P16562 243 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
VIPAS39-202ENST00000343765 CD33P20138 364 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 FAM168AQ92567 244 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 OSTCQ9NRP0 149 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 NAT8BQ9UHF3 227 aa11.9□□□□□ -0.51
VIPAS39-202ENST00000343765 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 ISLRO14498 428 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 TIMM23O14925 209 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 SCGB1D1O95968 90 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 DDTP30046 118 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms