RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 COLCA1Q6ZS62 124 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 TEX45Q8NA69 505 aa3.96□□□□□ -1.77
CSMD3-203ENST00000343508 C15orf62A8K5M9 175 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 LGALS3P17931 250 aaKnown RBP3.96□□□□□ -1.78
CSMD3-203ENST00000343508 CD33P20138 364 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 CD40P25942 277 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV1-2P23083 117 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 SPANXA1Q9NS26 97 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 COL4A6Q14031 1691 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 WIPF3A6NGB9 483 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 GUSBP1Q15486 140 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 SSC4DQ8WTU2 575 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 LYPD1Q8N2G4 141 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 ST6GALNAC3Q8NDV1 305 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 CLEC7AQ9BXN2 247 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 RP1P56715 2156 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 H3BRM9 83 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 GFRA1P56159 465 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF418Q8TF45 676 aaPredicted RBP3.96□□□□□ -1.78
CSMD3-203ENST00000343508 RNF166Q96A37 237 aaPredicted RBP3.96□□□□□ -1.78
CSMD3-203ENST00000343508 DNAH12Q6ZR08 3092 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 C16orf97H3BN30 126 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 FAM231BA6NCW3 169 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 CIRBPQ14011 172 aaKnown RBP3.96□□□□□ -1.78
CSMD3-203ENST00000343508 CT83Q5H943 113 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 C18orf32Q8TCD1 76 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 KIAA2026Q5HYC2 2103 aa3.96□□□□□ -1.78
CSMD3-203ENST00000343508 M0QZ24 198 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF581Q9P0T4 197 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 DOCK8Q8NF50 2099 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 A0A087X0K7 114 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV2OR16-5A0A0B4J2B6 119 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 C1orf185Q5T7R7 199 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 Q6P435 159 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 TEX29Q8N6K0 151 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 A0A0G2JMM0 328 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1W2PPB8 328 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 LINC00473A8K010 186 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 KIR3DP1A8MWS1 328 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 SMAGPQ0VAQ4 97 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 FOXF2Q12947 444 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 SYT8Q8NBV8 401 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 C5orf63A6NC05 138 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 ID1P41134 155 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 NHP2Q9NX24 153 aaKnown RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 PYYP10082 97 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 LEPP41159 167 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 PAPPA-AS1Q5QFB9 102 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 PVRIGQ6DKI7 326 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 Q8NFD4 153 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 IFI27L1Q96BM0 104 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 CYYR1Q96J86 154 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 HES7Q9BYE0 225 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 CACNA1IQ9P0X4 2223 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 FABP5P3A8MUU1 101 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 F8W1H4 67 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV3-48P01763 117 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 LYPD6Q86Y78 171 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 TNFRSF14Q92956 283 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 CEP192Q8TEP8 1941 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 SRRM5B3KS81 715 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 PSPNO60542 156 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 VWC2Q2TAL6 325 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 PPP1R32Q7Z5V6 425 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM14BQ9NUH8 114 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 CRIM1Q9NZV1 1036 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 KIAA0100Q14667 2235 aaKnown RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 SDK1Q7Z5N4 2213 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 GNG5P63218 68 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 TRIP6Q15654 476 aaKnown RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 ORMDL2Q53FV1 153 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 DGAT2L7PQ6IED9 249 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 MAFAQ8NHW3 353 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 hDV102S1A0JD36 115 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 LMO1P25800 156 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 LCN12Q6JVE5 192 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 Q6ZSR3 168 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 FBXL7Q9UJT9 491 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 FOXC2Q99958 501 aa3.95□□□□□ -1.78
CSMD3-203ENST00000343508 HEATR1Q9H583 2144 aaKnown RBP3.95□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1-6A0A0C4DH72 117 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 D6R8Y8 96 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CSTL1Q9H114 145 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CD3EP07766 207 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CKS1BP61024 79 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF479Q96JC4 524 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 SLC25A39Q9BZJ4 359 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 HAX1O00165 279 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PSG3Q16557 428 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 KIR3DS1Q14943 382 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 F5P12259 2224 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 FAM71F2Q6NXP2 309 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 FAM231DQ6ZW35 169 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 FAM169BQ8N8A8 192 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 COL5A1P20908 1838 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms