RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
CD55-202ENST00000343420 OR1S2Q8NGQ3 325 aa12.5□□□□□ -0.41
CD55-202ENST00000343420 RNF183Q96D59 192 aa12.5□□□□□ -0.41
CD55-202ENST00000343420 METTL26Q96S19 204 aa12.5□□□□□ -0.41
CD55-202ENST00000343420 V9GYH0 126 aa12.5□□□□□ -0.41
CD55-202ENST00000343420 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
CD55-202ENST00000343420 NXPH3O95157 252 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 NPY1RP25929 384 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 CRYBB3P26998 211 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 ZNF124Q15973 351 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 LYZL2Q7Z4W2 148 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 TMEM170AQ8WVE7 144 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 MS4A6AQ9H2W1 248 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
CD55-202ENST00000343420 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
CD55-202ENST00000343420 RND2P52198 227 aa12.48□□□□□ -0.41
CD55-202ENST00000343420 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
CD55-202ENST00000343420 ZNF79Q15937 498 aa12.48□□□□□ -0.41
CD55-202ENST00000343420 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
CD55-202ENST00000343420 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
CD55-202ENST00000343420 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
CD55-202ENST00000343420 U3KQ87 197 aa12.48□□□□□ -0.41
CD55-202ENST00000343420 IFNA10P01566 189 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 OR10J1P30954 320 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
CD55-202ENST00000343420 TMEM128Q5BJH2 165 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 CCDC190Q86UF4 302 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 DTD1Q8TEA8 209 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 Q8WTZ3 238 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 CSTL1Q9H114 145 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 AGRNO00468 2067 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 ALMS1Q8TCU4 4167 aa12.47□□□□□ -0.41
CD55-202ENST00000343420 A0A0J9YWU9 116 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 MPTX1A8MV57 137 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 ZNF701M0R085 212 aaPredicted RBP12.46□□□□□ -0.41
CD55-202ENST00000343420 P2RY1P47900 373 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 OR1S1Q8NH92 325 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 GRAMD2BQ96HH9 432 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
CD55-202ENST00000343420 RBKSQ9H477 322 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
CD55-202ENST00000343420 JTBO76095 146 aa12.45□□□□□ -0.42
CD55-202ENST00000343420 ATP5IP56385 69 aaPredicted RBP12.45□□□□□ -0.42
CD55-202ENST00000343420 DEFB131AP59861 70 aa12.45□□□□□ -0.42
CD55-202ENST00000343420 RBMS2Q15434 407 aaKnown RBP12.45□□□□□ -0.42
CD55-202ENST00000343420 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
CD55-202ENST00000343420 U3KQE9 123 aa12.45□□□□□ -0.42
CD55-202ENST00000343420 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
CD55-202ENST00000343420 SPANXN2Q5MJ10 180 aa12.44□□□□□ -0.42
CD55-202ENST00000343420 FAM24BQ8N5W8 94 aa12.44□□□□□ -0.42
CD55-202ENST00000343420 LRTM2Q8N967 370 aa12.44□□□□□ -0.42
CD55-202ENST00000343420 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CD55-202ENST00000343420 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
CD55-202ENST00000343420 HYDINQ4G0P3 5121 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 K7EQG2 157 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 PITX3O75364 302 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
CD55-202ENST00000343420 SLC25A6P12236 298 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 VAMP1P23763 118 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 EIF2B2P49770 351 aaKnown RBP12.43□□□□□ -0.42
CD55-202ENST00000343420 LEMD1Q68G75 181 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 GATAD1Q8WUU5 269 aa12.43□□□□□ -0.42
CD55-202ENST00000343420 HELTA6NFD8 242 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 SFT2D2O95562 160 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 TOMM40O96008 361 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 IFNA4P05014 189 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 IL4P05112 153 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 RD3LP0DJH9 198 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
CD55-202ENST00000343420 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.42
CD55-202ENST00000343420 USF2Q15853 346 aaPredicted RBP12.42□□□□□ -0.42
CD55-202ENST00000343420 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 TMEM217Q8N7C4 229 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 SRRQ9GZT4 340 aa12.42□□□□□ -0.42
CD55-202ENST00000343420 CXorf65A6NEN9 183 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 AP2S1P53680 142 aaPredicted RBP12.41□□□□□ -0.42
CD55-202ENST00000343420 PPP1R1AQ13522 171 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 STHQ8IWL8 128 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 GLMPQ8WWB7 406 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 RARRES2Q99969 163 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 TMED3Q9Y3Q3 217 aa12.41□□□□□ -0.42
CD55-202ENST00000343420 FAM90A26D6RGX4 464 aa12.4□□□□□ -0.42
CD55-202ENST00000343420 MED6O75586 246 aa12.4□□□□□ -0.42
CD55-202ENST00000343420 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
CD55-202ENST00000343420 PSG1P11464 419 aa12.4□□□□□ -0.42
CD55-202ENST00000343420 UBE2MP61081 183 aaKnown RBP12.4□□□□□ -0.42
CD55-202ENST00000343420 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
CD55-202ENST00000343420 SLC35E1Q96K37 410 aa12.4□□□□□ -0.42
CD55-202ENST00000343420 NUPR2A6NF83 97 aa12.39□□□□□ -0.43
CD55-202ENST00000343420 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms