RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 ZC2HC1BQ5TFG8 222 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 CD28P10747 220 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 SRSF7Q16629 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC18-201ENST00000343253 RTN4RL2Q86UN3 420 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 DUX3Q96PT4 197 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 IGHV3-49A0A0A0MS15 119 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 SMAD7O15105 426 aaKnown RBP9.05□□□□□ -0.96
CCDC18-201ENST00000343253 FOXL2P58012 376 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 PLAURQ03405 335 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
CCDC18-201ENST00000343253 TRIP12Q14669 1992 aaPredicted RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 TRBV20-1A0A075B6N2 111 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 CCL21O00585 134 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 SUPT4H1P63272 117 aaKnown RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 ZNF48Q96MX3 618 aaPredicted RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 FAM90A2PQ658T7 463 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 FAM57AQ8TBR7 257 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 SPANXCQ9NY87 97 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 RNF115Q9Y4L5 304 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 SELENOKQ9Y6D0 94 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 SHANK3Q9BYB0 1731 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 OTOFQ9HC10 1997 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 MRPL20Q9BYC9 149 aaKnown RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 COL5A3P25940 1745 aaPredicted RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 IGKV1-9A0A0C4DH69 117 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 TOMM40O96008 361 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 CD7P09564 240 aa9.04□□□□□ -0.96
CCDC18-201ENST00000343253 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
CCDC18-201ENST00000343253 NPIPB5A8MRT5 1133 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 B9A039 149 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 D6R8Y8 96 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 RNASE4P34096 147 aaKnown RBP9.03□□□□□ -0.96
CCDC18-201ENST00000343253 TMEM42Q69YG0 159 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 CHAC1Q9BUX1 264 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 MED12Q93074 2177 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 ANKRD31Q8N7Z5 1873 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 FOXH1O75593 365 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 SCN4AP35499 1836 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 C9orf172C9J069 976 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 EFEMP2O95967 443 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 EVI2AP22794 236 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 C1orf53Q5VUE5 145 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 C9JAW5 83 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 CD33P20138 364 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 TMEM14EPQ6UXP3 125 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 C1orf162Q8NEQ5 155 aaPredicted RBP9.03□□□□□ -0.96
CCDC18-201ENST00000343253 PIKFYVEQ9Y2I7 2098 aa9.03□□□□□ -0.96
CCDC18-201ENST00000343253 ADCYAP1P18509 176 aa9.02□□□□□ -0.96
CCDC18-201ENST00000343253 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.96
CCDC18-201ENST00000343253 ATP6V0BQ99437 205 aa9.02□□□□□ -0.96
CCDC18-201ENST00000343253 CADP27708 2225 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 LY75O60449 1722 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 DUSP14O95147 198 aaKnown RBP9.02□□□□□ -0.97
CCDC18-201ENST00000343253 INAFM2P0DMQ5 153 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 DUTP33316 252 aaKnown RBP9.02□□□□□ -0.97
CCDC18-201ENST00000343253 MESP2Q0VG99 397 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 NMSQ5H8A3 153 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
CCDC18-201ENST00000343253 DEFB123Q8N688 67 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 K7EP13 123 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 NPSP0C0P6 89 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 IGLC2P0DOY2 106 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 IGLC3P0DOY3 106 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 SLAQ13239 276 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 PCOLCEQ15113 449 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 NUP35Q8NFH5 326 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 GFI1Q99684 422 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 SCN8AQ9UQD0 1980 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 IGHV3-66A0A0C4DH42 116 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 IQCF6A8MYZ5 107 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 F8W1H4 67 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 MST1P26927 711 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 GAS1P54826 345 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 MORN2Q502X0 79 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 WBP1Q96G27 269 aa9.02□□□□□ -0.97
CCDC18-201ENST00000343253 COL4A5P29400 1685 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 IGKV3D-20A0A0C4DH25 116 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 SLC25A39Q9BZJ4 359 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-201ENST00000343253 TSSC4Q9Y5U2 329 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-201ENST00000343253 S4R3C0 116 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 SCN2AQ99250 2005 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 CHD5Q8TDI0 1954 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 SAA2-SAA4A0A096LPE2 208 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 SAA2P0DJI9 122 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-201ENST00000343253 COX6A1P12074 109 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 LYL1P12980 280 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 MYOD1P15172 320 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 PSG7Q13046 419 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
CCDC18-201ENST00000343253 CITED2Q99967 270 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms