RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 OR10P1Q8NGE3 313 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 KCNS1Q96KK3 526 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 HELZ2Q9BYK8 2649 aaKnown RBP12.31□□□□□ -0.44
BRAT1-201ENST00000340611 NDUFS7O75251 213 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
BRAT1-201ENST00000340611 MZT1Q08AG7 82 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 ATP6V0BQ99437 205 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 SNAI2O43623 268 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 COL8A2P25067 703 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 SRIP30626 198 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 SSTR5P35346 364 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 EDDM3BP56851 147 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 HTD2P86397 168 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 UBTD1Q9HAC8 227 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 DOPEY2Q9Y3R5 2298 aa12.31□□□□□ -0.44
BRAT1-201ENST00000340611 A0A087X0K7 114 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 VSTM5A8MXK1 200 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 VENTXO95231 258 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 GATA4P43694 442 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 SRSF1Q07955 248 aaKnown RBP eCLIP12.3□□□□□ -0.44
BRAT1-201ENST00000340611 DEFB125Q8N687 156 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 TCL1AP56279 114 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 Q0VG73 95 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 UTF1Q5T230 341 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 TMEM14EPQ6UXP3 125 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 SSX8Q7RTT4 187 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF439Q8NDP4 499 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 OR13A1Q8NGR1 328 aa12.3□□□□□ -0.44
BRAT1-201ENST00000340611 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 PPIAL4EA0A075B759 164 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 PPIAL4CA0A0B4J2A2 164 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 FAM231BA6NCW3 169 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 B9A039 149 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 RAMP3O60896 148 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 PPIAL4FP0DN26 164 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 G6PCP35575 357 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
BRAT1-201ENST00000340611 LYPD2Q6UXB3 125 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 NBPF19A0A087WUL8 3843 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 CKS1BP61024 79 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
BRAT1-201ENST00000340611 FCN3O75636 299 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 DRAM1Q8N682 238 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 ZNF48Q96MX3 618 aaPredicted RBP12.28□□□□□ -0.44
BRAT1-201ENST00000340611 MS4A5Q9H3V2 200 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
BRAT1-201ENST00000340611 PTPN13Q12923 2485 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 FBLL1A6NHQ2 334 aaKnown RBP12.28□□□□□ -0.44
BRAT1-201ENST00000340611 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
BRAT1-201ENST00000340611 TRAV38-1A0A0B4J264 116 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 C12orf77C9JDV5 145 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 CFHR2P36980 270 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 PLP1P60201 277 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 KIR3DL3Q8N743 410 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 OCC1Q8TAD7 63 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 TMEM147Q9BVK8 224 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 TIMM9Q9Y5J7 89 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 TANC2Q9HCD6 1990 aa12.27□□□□□ -0.44
BRAT1-201ENST00000340611 C7orf71A4D174 169 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 OOEPA6NGQ2 149 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 NPY1RP25929 384 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 EFNB3Q15768 340 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 GAFA1Q96PS6 74 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 MCRIP2Q9BUT9 160 aaKnown RBP12.27□□□□□ -0.45
BRAT1-201ENST00000340611 NPCDR1Q9BY65 106 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
BRAT1-201ENST00000340611 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 H0Y8G0 127 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 TMEM178BH3BS89 294 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
BRAT1-201ENST00000340611 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
BRAT1-201ENST00000340611 SLAQ13239 276 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 SPATA12Q7Z6I5 190 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 AP1S3Q96PC3 154 aa12.27□□□□□ -0.45
BRAT1-201ENST00000340611 TMEM30CPA0ZSE6 113 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
BRAT1-201ENST00000340611 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 ZNF788Q6ZQV5 615 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
BRAT1-201ENST00000340611 MGST1P10620 155 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms