RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 C11orf44Q8N8P7 122 aa12.05□□□□□ -0.48
RET-201ENST00000340058 IGHV3OR16-12A0A075B7B8 117 aa12.04□□□□□ -0.48
RET-201ENST00000340058 K7ENP7 123 aa12.04□□□□□ -0.48
RET-201ENST00000340058 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
RET-201ENST00000340058 ASCL2Q99929 193 aa12.04□□□□□ -0.48
RET-201ENST00000340058 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
RET-201ENST00000340058 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
RET-201ENST00000340058 GOLT1BQ9Y3E0 138 aa12.04□□□□□ -0.48
RET-201ENST00000340058 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.04□□□□□ -0.48
RET-201ENST00000340058 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
RET-201ENST00000340058 PEX7O00628 323 aa12.04□□□□□ -0.48
RET-201ENST00000340058 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
RET-201ENST00000340058 CCKARP32238 428 aa12.04□□□□□ -0.48
RET-201ENST00000340058 GGACTQ9BVM4 153 aa12.04□□□□□ -0.48
RET-201ENST00000340058 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
RET-201ENST00000340058 ZNF134P52741 427 aa12.03□□□□□ -0.48
RET-201ENST00000340058 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
RET-201ENST00000340058 MGST2Q99735 147 aa12.03□□□□□ -0.48
RET-201ENST00000340058 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
RET-201ENST00000340058 XIRP2A4UGR9 3374 aa12.03□□□□□ -0.48
RET-201ENST00000340058 TRBV6-6A0A0A6YYG2 114 aa12.03□□□□□ -0.48
RET-201ENST00000340058 NPPCP23582 126 aa12.03□□□□□ -0.48
RET-201ENST00000340058 PAX9P55771 341 aa12.03□□□□□ -0.48
RET-201ENST00000340058 KLK15Q9H2R5 256 aa12.03□□□□□ -0.48
RET-201ENST00000340058 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
RET-201ENST00000340058 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
RET-201ENST00000340058 TCF24Q7RTU0 167 aa12.03□□□□□ -0.48
RET-201ENST00000340058 MAPK1IP1LQ8NDC0 245 aa12.03□□□□□ -0.48
RET-201ENST00000340058 NDUFS7O75251 213 aa12.02□□□□□ -0.48
RET-201ENST00000340058 MAS1LP35410 378 aa12.02□□□□□ -0.48
RET-201ENST00000340058 ERVK11-1P61568 191 aa12.02□□□□□ -0.48
RET-201ENST00000340058 ATP5G2Q06055 141 aa12.02□□□□□ -0.48
RET-201ENST00000340058 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.48
RET-201ENST00000340058 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.48
RET-201ENST00000340058 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.49
RET-201ENST00000340058 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
RET-201ENST00000340058 CKS2P33552 79 aa12.02□□□□□ -0.49
RET-201ENST00000340058 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
RET-201ENST00000340058 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
RET-201ENST00000340058 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
RET-201ENST00000340058 TMEM116Q8NCL8 245 aa12.02□□□□□ -0.49
RET-201ENST00000340058 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
RET-201ENST00000340058 MSRB2Q9Y3D2 182 aa12.02□□□□□ -0.49
RET-201ENST00000340058 COLCA2A8K830 154 aa12.01□□□□□ -0.49
RET-201ENST00000340058 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
RET-201ENST00000340058 DKK4Q9UBT3 224 aa12.01□□□□□ -0.49
RET-201ENST00000340058 COL4A4P53420 1690 aaPredicted RBP12.01□□□□□ -0.49
RET-201ENST00000340058 PPIFP30405 207 aaKnown RBP12.01□□□□□ -0.49
RET-201ENST00000340058 LYPD6Q86Y78 171 aa12.01□□□□□ -0.49
RET-201ENST00000340058 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
RET-201ENST00000340058 MRPL32Q9BYC8 188 aaKnown RBP12.01□□□□□ -0.49
RET-201ENST00000340058 CNTFRP26992 372 aa12.01□□□□□ -0.49
RET-201ENST00000340058 TEX45Q8NA69 505 aa12.01□□□□□ -0.49
RET-201ENST00000340058 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
RET-201ENST00000340058 LINC00479Q96M42 142 aa12.01□□□□□ -0.49
RET-201ENST00000340058 Q9H3A6 140 aa12.01□□□□□ -0.49
RET-201ENST00000340058 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
RET-201ENST00000340058 POLQO75417 2590 aa12.01□□□□□ -0.49
RET-201ENST00000340058 H0YJW9 148 aa12.01□□□□□ -0.49
RET-201ENST00000340058 SRD5A1P18405 259 aa12.01□□□□□ -0.49
RET-201ENST00000340058 HIST1H1AQ02539 215 aaPredicted RBP12.01□□□□□ -0.49
RET-201ENST00000340058 WFDC12Q8WWY7 111 aa12.01□□□□□ -0.49
RET-201ENST00000340058 ANAPC10Q9UM13 185 aa12.01□□□□□ -0.49
RET-201ENST00000340058 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
RET-201ENST00000340058 HLA-DQA1P01909 254 aa12□□□□□ -0.49
RET-201ENST00000340058 CA7P43166 264 aa12□□□□□ -0.49
RET-201ENST00000340058 PRSS8Q16651 343 aa12□□□□□ -0.49
RET-201ENST00000340058 EPG5Q9HCE0 2579 aa12□□□□□ -0.49
RET-201ENST00000340058 IGFL4Q6B9Z1 124 aa12□□□□□ -0.49
RET-201ENST00000340058 Q6ZS49 121 aa12□□□□□ -0.49
RET-201ENST00000340058 AGMATQ9BSE5 352 aa12□□□□□ -0.49
RET-201ENST00000340058 SPRY4Q9C004 299 aa12□□□□□ -0.49
RET-201ENST00000340058 BPESC1Q9GZL8 116 aa12□□□□□ -0.49
RET-201ENST00000340058 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
RET-201ENST00000340058 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
RET-201ENST00000340058 RHOGP84095 191 aa12□□□□□ -0.49
RET-201ENST00000340058 COX19Q49B96 90 aa12□□□□□ -0.49
RET-201ENST00000340058 SPSB3Q6PJ21 355 aa12□□□□□ -0.49
RET-201ENST00000340058 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
RET-201ENST00000340058 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
RET-201ENST00000340058 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
RET-201ENST00000340058 VENTXO95231 258 aa11.99□□□□□ -0.49
RET-201ENST00000340058 BMI1P35226 326 aa11.99□□□□□ -0.49
RET-201ENST00000340058 SCRT1Q9BWW7 348 aa11.99□□□□□ -0.49
RET-201ENST00000340058 TMEM191AQ9H0A3 160 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BKO60814 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BJP06899 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BOP23527 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BBP33778 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BDP58876 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BCP62807 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST2H2BEQ16778 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.99□□□□□ -0.49
RET-201ENST00000340058 CENPVQ7Z7K6 275 aaPredicted RBP11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BHQ93079 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BNQ99877 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 HIST1H2BMQ99879 126 aa11.99□□□□□ -0.49
RET-201ENST00000340058 CD33P20138 364 aa11.99□□□□□ -0.49
RET-201ENST00000340058 CX3CL1P78423 397 aa11.99□□□□□ -0.49
RET-201ENST00000340058 SLC25A48Q6ZT89 311 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms