RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 C1orf229Q6ZS94 237 aaPredicted RBP9.79□□□□□ -0.84
USP1-201ENST00000339950 OR1L8Q8NGR8 309 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 AMMECR1Q9Y4X0 333 aaPredicted RBP9.79□□□□□ -0.84
USP1-201ENST00000339950 TMEM265A0A087WTH1 108 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 GLRXP35754 106 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 SRP14P37108 136 aaKnown RBP9.79□□□□□ -0.84
USP1-201ENST00000339950 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
USP1-201ENST00000339950 OR8B2Q96RD0 313 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 WNT2P09544 360 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 TDGF1P3P51864 188 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 ZNF138P52744 262 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 OR8A1Q8NGG7 326 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 PRNDQ9UKY0 176 aa9.79□□□□□ -0.84
USP1-201ENST00000339950 K7ERU9 68 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 HTR1DP28221 377 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 RIPPLY3P57055 190 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 TM4SF20Q53R12 229 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 PRSS3P2Q8NHM4 247 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 RAB9BQ9NP90 201 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 SFTPCP11686 197 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 FXYD7P58549 80 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 KRTAP27-1Q3LI81 207 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 C1orf185Q5T7R7 199 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 PDPNQ86YL7 162 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 WFDC3Q8IUB2 231 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 A0A1W2PN81 502 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 SH2D7A6NKC9 451 aaPredicted RBP9.78□□□□□ -0.84
USP1-201ENST00000339950 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP1-201ENST00000339950 LINC00305Q7Z4B0 112 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 OR8B3Q8NGG8 313 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 TNFRSF19Q9NS68 423 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 TMEM242Q9NWH2 141 aa9.78□□□□□ -0.84
USP1-201ENST00000339950 POLR3KQ9Y2Y1 108 aaPredicted RBP9.78□□□□□ -0.84
USP1-201ENST00000339950 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 IGKV3-15P01624 115 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 VMA21Q3ZAQ7 101 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 ZNF841Q6ZN19 808 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 Q8NFD4 153 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 YPEL4Q96NS1 127 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 TIMM9Q9Y5J7 89 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 SLC25A15Q9Y619 301 aa9.77□□□□□ -0.84
USP1-201ENST00000339950 CNTFRP26992 372 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 SRSF7Q16629 238 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP1-201ENST00000339950 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 C15orf61A6NNL5 157 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 TNFSF13O75888 250 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 LMO1P25800 156 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 GBGT1Q8N5D6 347 aa9.77□□□□□ -0.85
USP1-201ENST00000339950 TEX50A0A1B0GTY4 177 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 GAGE10A6NGK3 116 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 C8orf88P0DMB2 117 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 C1orf194Q5T5A4 169 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 COL8A1P27658 744 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 WDR73Q6P4I2 378 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 SLC25A33Q9BSK2 321 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 TMEM167BQ9NRX6 74 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 TRBV6-6A0A0A6YYG2 114 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 TDGF1P13385 188 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 BPIFB3P59826 476 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 FA2HQ7L5A8 372 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
USP1-201ENST00000339950 TNRC18O15417 2968 aaPredicted RBP9.76□□□□□ -0.85
USP1-201ENST00000339950 DSCAMO60469 2012 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 CORTO00230 105 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
USP1-201ENST00000339950 IGFL4Q6B9Z1 124 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 FAM168AQ92567 244 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 KCNS1Q96KK3 526 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 HIF1ANQ9NWT6 349 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 C15orf65H3BRN8 121 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 CT45A6P0DMU7 189 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 CT45A5P0DMU8 189 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 CT45A7P0DMV0 189 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 TIMM23BQ5SRD1 257 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 ELOVL5Q9NYP7 299 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 HIVEP3Q5T1R4 2406 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 DSCAML1Q8TD84 2053 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 YPEL1O60688 119 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 OR2J3O76001 311 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 CRYABP02511 175 aaKnown RBP9.75□□□□□ -0.85
USP1-201ENST00000339950 AREGP15514 252 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 NMUP48645 174 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
USP1-201ENST00000339950 E7EUB6 86 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 PPOXP50336 477 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 BEND2Q8NDZ0 799 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
USP1-201ENST00000339950 F11RQ9Y624 299 aaKnown RBP9.74□□□□□ -0.85
USP1-201ENST00000339950 RELNP78509 3460 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms