RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
USP47-202ENST00000339865 FAM90A2PQ658T7 463 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 VN1R4Q7Z5H5 301 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 OR5P3Q8WZ94 311 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 SCN10AQ9Y5Y9 1956 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 A0A1W2PRE2 83 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
USP47-202ENST00000339865 CCL4P13236 92 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 LHX2P50458 406 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 JPT1Q9UK76 154 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 NDUFS5O43920 106 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 A0A0J9YW62 118 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 FXYD7P58549 80 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
USP47-202ENST00000339865 CD5P06127 495 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
USP47-202ENST00000339865 EML5Q05BV3 1969 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
USP47-202ENST00000339865 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 CRYBA2P53672 197 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 C1QL4Q86Z23 238 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 TTTY12Q9BZ98 90 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 HAMPP81172 84 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 FAM110DQ8TAY7 271 aaPredicted RBP10.81□□□□□ -0.68
USP47-202ENST00000339865 A0A1W2PQF6 199 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 CFHR5Q9BXR6 569 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 C21orf140B9A014 251 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 PPBPP02775 128 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 C9orf40Q8IXQ3 194 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 PILRBQ9UKJ0 227 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 IGHV5-10-1A0A0J9YXX1 117 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 KLF14Q8TD94 323 aaPredicted RBP10.81□□□□□ -0.68
USP47-202ENST00000339865 IFI27L2Q9H2X8 130 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 RGPD3A6NKT7 1758 aaPredicted RBP10.81□□□□□ -0.68
USP47-202ENST00000339865 RGPD4Q7Z3J3 1758 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 ZP4Q12836 540 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 ARPC1AQ92747 370 aa10.81□□□□□ -0.68
USP47-202ENST00000339865 MSGN1A6NI15 193 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 TRAV25A0A0B4J276 109 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 TMEM54Q969K7 222 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 SOCS3O14543 225 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 PEX11BO96011 259 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 CD55P08174 381 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 F2Z2F3 143 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
USP47-202ENST00000339865 ZMAT4Q9H898 229 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
USP47-202ENST00000339865 NABP1Q96AH0 204 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
USP47-202ENST00000339865 CCL20P78556 96 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 MPV17L2Q567V2 206 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 MRPS18AQ9NVS2 196 aaKnown RBP10.79□□□□□ -0.68
USP47-202ENST00000339865 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 SELLP14151 372 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 COL9A1P20849 921 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 ASPHD2Q6ICH7 369 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 GATA4P43694 442 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 ATP5IP56385 69 aaPredicted RBP10.79□□□□□ -0.68
USP47-202ENST00000339865 COL16A1Q07092 1604 aaPredicted RBP10.79□□□□□ -0.68
USP47-202ENST00000339865 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
USP47-202ENST00000339865 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 ZNF474Q6S9Z5 364 aaPredicted RBP10.79□□□□□ -0.68
USP47-202ENST00000339865 Q96M66 194 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 LRP6O75581 1613 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 SAP30O75446 220 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 HEPN1Q6WQI6 88 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 DSCR8Q96T75 97 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 C7orf69Q9H7B7 122 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 OTORQ9NRC9 128 aa10.79□□□□□ -0.68
USP47-202ENST00000339865 IGHV1-69-2A0A0G2JMI3 117 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 CENPVL1A0A0U1RR11 272 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 MESP2Q0VG99 397 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 BTAF1O14981 1849 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 D6R8Y8 96 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 IFNL4K9M1U5 179 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 IGHG3P01860 377 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
USP47-202ENST00000339865 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 SLC25A28Q96A46 364 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 C2orf16Q68DN1 1984 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 SLC50A1Q9BRV3 221 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 DEPPQ9NTK1 212 aa10.78□□□□□ -0.68
USP47-202ENST00000339865 AMBPP02760 352 aa10.77□□□□□ -0.68
USP47-202ENST00000339865 BAALCQ8WXS3 180 aa10.77□□□□□ -0.68
USP47-202ENST00000339865 IMMP1LQ96LU5 166 aa10.77□□□□□ -0.68
USP47-202ENST00000339865 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.68
USP47-202ENST00000339865 CSPG4Q6UVK1 2322 aa10.77□□□□□ -0.69
USP47-202ENST00000339865 WNT2P09544 360 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms