RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SCGB2A2Q13296 93 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 RPP25LQ8N5L8 163 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 KLK9Q9UKQ9 250 aa11.53□□□□□ -0.56
CDK5RAP3-201ENST00000338399 A0A1B0GV50 99 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CLN5O75503 358 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 EIF3GO75821 320 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 IGHV3-23P01764 117 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MFAP4P55083 255 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ESM1Q9NQ30 184 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
CDK5RAP3-201ENST00000338399 IGLC1P0CG04 106 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 NECAP1Q8NC96 275 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TRGV9Q99603 122 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 C21orf62Q9NYP8 219 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 HIVEP2P31629 2446 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 NPBWR1P48145 328 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TIGITQ495A1 244 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MED9Q9NWA0 146 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF580Q9UK33 172 aa11.51□□□□□ -0.57
CDK5RAP3-201ENST00000338399 F8W735 103 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-201ENST00000338399 GNG7O60262 68 aa11.5□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TRGV3P03979 118 aa11.5□□□□□ -0.57
CDK5RAP3-201ENST00000338399 Q56UQ5 140 aa11.5□□□□□ -0.57
CDK5RAP3-201ENST00000338399 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 HMGB3O15347 200 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SELENOTP62341 195 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CFHR3Q02985 330 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ACTR3CQ9C0K3 210 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 IGKV1-17P01599 117 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 PF4V1P10720 104 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
CDK5RAP3-201ENST00000338399 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 OR2T8A6NH00 312 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 H3BUA1 57 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TPPP2P59282 170 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CCL20P78556 96 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF502Q8TBZ5 544 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MARC2Q969Z3 335 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TXN2Q99757 166 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 KLK15Q9H2R5 256 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 DOK5Q9P104 306 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CUBNO60494 3623 aa11.48□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TRAV30A0A087WSZ9 112 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SEC14L6B5MCN3 397 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 BRI3O95415 125 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 PSG1P11464 419 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 C10orf99Q6UWK7 81 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 Q8N2B8 174 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TMEM37Q8WXS4 190 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 EEF1AKMT3Q96AZ1 226 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 MTORP42345 2549 aa11.47□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CYSRT1A8MQ03 144 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 CLDN34H7C241 214 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 HBE1P02100 147 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FCGR2BP31994 310 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 FAM78BQ5VT40 261 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.57
CDK5RAP3-201ENST00000338399 TRBV7-1A0A0A6YYK4 115 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TRAV1-1A0A0B4J248 108 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PSMB11A5LHX3 300 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 IGHG4P01861 327 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CLEC3BP05452 202 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CTSGP08311 255 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RD3LP0DJH9 198 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ORM2P19652 201 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GPR183P32249 361 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms