RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 FAM208BQ5VWN6 2430 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 USP24Q9UPU5 2620 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 GGTLC3B5MD39 225 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 H3BTX0 84 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 FAM71F2Q6NXP2 309 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 PRORYQ9H606 182 aa18.48■□□□□ 0.55
CLPTM1-201ENST00000337392 A0A1W2PN81 502 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 SLC17A3O00476 420 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 LIPFP07098 398 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 RPL27AP46776 148 aaKnown RBP18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 LEMD1Q68G75 181 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 PPP1R27Q86WC6 154 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 ORM2P19652 201 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 BPIFB3P59826 476 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 NHLRC2Q8NBF2 726 aa18.47■□□□□ 0.55
CLPTM1-201ENST00000337392 OR5G3P0C626 314 aa18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 SUMO1P63165 101 aaKnown RBP18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 DYNAPQ8N1N2 210 aa18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 LRRK2Q5S007 2527 aa18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 PSMB11A5LHX3 300 aa18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 KLF17Q5JT82 389 aaPredicted RBP18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 SSBP3Q9BWW4 388 aaPredicted RBP18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 SLC25A2Q9BXI2 301 aa18.46■□□□□ 0.55
CLPTM1-201ENST00000337392 PHOX2AO14813 284 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 CRYGBP07316 175 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 LGALS7P47929 136 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 MMDQ15546 238 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 OR5AU1Q8NGC0 362 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 OR4X1Q8NH49 305 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 GPR61Q9BZJ8 451 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 CTDSP1Q9GZU7 261 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 EREGO14944 169 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 LCN2P80188 198 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 TMEM249Q2WGJ8 235 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 SGK494Q96LW2 274 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 OR5B12Q96R08 314 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 ZNF355PQ9NSJ1 428 aa18.45■□□□□ 0.54
CLPTM1-201ENST00000337392 TRBV24-1A0A075B6N3 115 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 TIMD4Q96H15 378 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 FAM167A-AS1Q96KT0 104 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 LOC105371242A0A075B767 164 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 TEX22C9J3V5 150 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 LY6LH3BQJ8 138 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 FRMD6-AS1P0C7T7 363 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 COMPP49747 757 aaPredicted RBP18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 HES1Q14469 280 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 LY6G5BQ8NDX9 201 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 BEND2Q8NDZ0 799 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 OR4A5Q8NH83 315 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 LPAR2Q9HBW0 351 aa18.44■□□□□ 0.54
CLPTM1-201ENST00000337392 ZNF462Q96JM2 2506 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 F6UZH7 168 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 KIR3DL3Q8N743 410 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 OR1B1Q8NGR6 318 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 ITLN2Q8WWU7 325 aaPredicted RBP18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 SRSF12Q8WXF0 261 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 SFRP2Q96HF1 295 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 TECRQ9NZ01 308 aaKnown RBP18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 ABCA2Q9BZC7 2435 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 EPG5Q9HCE0 2579 aa18.43■□□□□ 0.54
CLPTM1-201ENST00000337392 FNDC10F2Z333 226 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 COX7A2P2O60397 106 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 MMD2Q8IY49 270 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 VENTXO95231 258 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 UBE2L3P68036 154 aaKnown RBP18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 CACNG8Q8WXS5 425 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 DNAJC4Q9NNZ3 241 aa18.42■□□□□ 0.54
CLPTM1-201ENST00000337392 MT-CO2P00403 227 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 HTR1DP28221 377 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 DNLZQ5SXM8 178 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 TEX45Q8NA69 505 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 C8orf88P0DMB2 117 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 RAB4AP20338 218 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 TPTE2P1Q5T6R2 138 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 SGMS2Q8NHU3 365 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 C8orf46Q8TAG6 207 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 TNFRSF19Q9NS68 423 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 DOPEY1Q5JWR5 2465 aa18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 USP9YO00507 2555 aaPredicted RBP18.41■□□□□ 0.54
CLPTM1-201ENST00000337392 TCRBV4S1A1TA0A5B7 111 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 CNIH1O95406 144 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 PQLC2Q6ZP29 291 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 LINC00305Q7Z4B0 112 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 RNASEH2CQ8TDP1 164 aaKnown RBP18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 BLNKQ8WV28 456 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 TNFRSF14Q92956 283 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 CHODLQ9H9P2 273 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 A0A1B0GUS0 222 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 A8MWP6 167 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 SUB1P53999 127 aaKnown RBP eCLIP18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 C10orf113Q5VZT2 155 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 OR2T10Q8NGZ9 312 aa18.4■□□□□ 0.54
CLPTM1-201ENST00000337392 TRAV34A0A0B4J273 112 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 PPP5D1E7EU14 171 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 SPINK4O60575 86 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 GPR6P46095 362 aaPredicted RBP18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 FXYD3Q14802 87 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 CENPWQ5EE01 88 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 TEX38Q6PEX7 206 aa18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 VMO1Q7Z5L0 202 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms