RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CLEC7AQ9BXN2 247 aa7.09□□□□□ -1.28
SNCA-201ENST00000336904 IGHV3OR16-10A0A075B7F0 116 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 IGHV2-70P01814 119 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 RPL27AP46776 148 aaKnown RBP7.08□□□□□ -1.28
SNCA-201ENST00000336904 LCN2P80188 198 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 LINC00305Q7Z4B0 112 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 OR10G8Q8NGN5 311 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 FAM168AQ92567 244 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
SNCA-201ENST00000336904 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 TMEM242Q9NWH2 141 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 FKBP11Q9NYL4 201 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 TECRQ9NZ01 308 aaKnown RBP7.08□□□□□ -1.28
SNCA-201ENST00000336904 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.08□□□□□ -1.28
SNCA-201ENST00000336904 HELTA6NFD8 242 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 RBP4P02753 201 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 IER3P46695 156 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 GNG4P50150 75 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 RAB4BP61018 213 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 SSTP61278 116 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 PMS2P11Q13670 270 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 C10orf113Q5VZT2 155 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
SNCA-201ENST00000336904 BCL6BQ8N143 479 aaPredicted RBP7.08□□□□□ -1.28
SNCA-201ENST00000336904 DYNAPQ8N1N2 210 aa7.08□□□□□ -1.28
SNCA-201ENST00000336904 ZNF705GA8MUZ8 300 aaPredicted RBP7.07□□□□□ -1.28
SNCA-201ENST00000336904 MT-CO2P00403 227 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 IGLV1-47P01700 117 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 ADMP35318 185 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 LYZP61626 148 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 OR8B3Q8NGG8 313 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 FAM167A-AS1Q96KT0 104 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 OR8B2Q96RD0 313 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 DNAJC4Q9NNZ3 241 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 TNFRSF19Q9NS68 423 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 SIGLEC9Q9Y336 463 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 C19orf84I3L1E1 186 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 AMBPP02760 352 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 PPP1R27Q86WC6 154 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 KAAG1Q9UBP8 84 aa7.07□□□□□ -1.28
SNCA-201ENST00000336904 CORTO00230 105 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 KCNIP4Q6PIL6 250 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 OR1P1Q8NH06 330 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 SRSF12Q8WXF0 261 aaKnown RBP7.06□□□□□ -1.28
SNCA-201ENST00000336904 ANAPC16Q96DE5 110 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 TRAV8-1A0A0A6YYK1 113 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 NCBP2LA6PVI3 153 aaKnown RBP7.06□□□□□ -1.28
SNCA-201ENST00000336904 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
SNCA-201ENST00000336904 VSTM2AQ8TAG5 236 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 PAXXQ9BUH6 204 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 USP9YO00507 2555 aaPredicted RBP7.06□□□□□ -1.28
SNCA-201ENST00000336904 CSPG4Q6UVK1 2322 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 A0A1W2PN81 502 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 ISLRO14498 428 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 GGCTO75223 188 aaKnown RBP7.06□□□□□ -1.28
SNCA-201ENST00000336904 VENTXO95231 258 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 PRRX1P54821 245 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 TIGITQ495A1 244 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 ST6GALNAC3Q8NDV1 305 aa7.06□□□□□ -1.28
SNCA-201ENST00000336904 TCRBV4S1A1TA0A5B7 111 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 PSMB11A5LHX3 300 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 GNLYP22749 145 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 MMD2Q8IY49 270 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 OR1L6Q8NGR2 347 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 C17orf77Q96MU5 243 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 PYGO2Q9BRQ0 406 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 LRRK2Q5S007 2527 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 TEX22C9J3V5 150 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 WNT10AQ9GZT5 417 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
SNCA-201ENST00000336904 A6NNC1 897 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 SNURFLB1AK76 121 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 MC5RP33032 325 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 TMEM183AQ8IXX5 376 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 EXOC3-AS1Q8N2X6 119 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 LINC00311Q8N616 119 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 RAB1BQ9H0U4 201 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 SLC25A5P05141 298 aaKnown RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 LIPFP07098 398 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 PSG1P11464 419 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 SRP14P37108 136 aaKnown RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 SUB1P53999 127 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNCA-201ENST00000336904 TAS2R45P59539 299 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 PFDN5Q99471 154 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 TCEAL7Q9BRU2 100 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 PITPNC1Q9UKF7 332 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 AMMECR1Q9Y4X0 333 aaPredicted RBP7.04□□□□□ -1.28
SNCA-201ENST00000336904 V9GYV3 84 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
SNCA-201ENST00000336904 LOC105371242A0A075B767 164 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 PGPA6NDG6 321 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 IGLV2-8P01709 118 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 HTR1DP28221 377 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms