RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 GOLT1AQ6ZVE7 132 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 OR4C5Q8NGB2 326 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 MIXL1Q9H2W2 232 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 ZNF256Q9Y2P7 627 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-201ENST00000336596 PSG1P11464 419 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 LAIR2Q6ISS4 152 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 MORN3Q6PF18 240 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-201ENST00000336596 GAFA1Q96PS6 74 aa6.07□□□□□ -1.44
EPHA3-201ENST00000336596 POLEQ07864 2286 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 FREM3P0C091 2139 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 TGIF2-C20orf24A0A0A6YYL0 155 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 ADARB2-AS1A8MUL3 147 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 C1QL1O75973 258 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 CD7P09564 240 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 GCHFRP30047 84 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 MFAP2P55001 183 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 ICAM4Q14773 271 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 COL4A3Q01955 1670 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 PIN1P1O15428 100 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 DNAL4O96015 105 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 CSN3P07498 182 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 IFI27P40305 119 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-201ENST00000336596 B3GALT5-AS1P59052 145 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 CD200R1LQ6Q8B3 271 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 Q8NFD4 153 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 OR10AG1Q8NH19 301 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 ZNF502Q8TBZ5 544 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 RCHY1Q96PM5 261 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 ROS1P08922 2347 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 PLXNB3Q9ULL4 1909 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 OR10J3Q5JRS4 329 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 IGFL2Q6UWQ7 119 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 TRBV20OR9-2A0A075B6H5 130 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 DPRXA6NFQ7 191 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 MPTX1A8MV57 137 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 UCP1P25874 307 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 ZNF474Q6S9Z5 364 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-201ENST00000336596 FOXL2NBQ6ZUU3 175 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
EPHA3-201ENST00000336596 CXorf65A6NEN9 183 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 IGHV3-23P01764 117 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 LBHQ53QV2 105 aaPredicted RBP6.05□□□□□ -1.44
EPHA3-201ENST00000336596 VPREB3Q9UKI3 123 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 PLXND1Q9Y4D7 1925 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 TRBV6-6A0A0A6YYG2 114 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 RHODO00212 210 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 CXCL2P19875 107 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 SAA4P35542 130 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 OR5AC2Q9NZP5 309 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 PCNX1Q96RV3 2341 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 FOXG1P55316 489 aaPredicted RBP6.05□□□□□ -1.44
EPHA3-201ENST00000336596 PRR30Q53SZ7 412 aaPredicted RBP6.05□□□□□ -1.44
EPHA3-201ENST00000336596 ST6GAL2Q96JF0 529 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 F8WEM9 126 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 VENTXO95231 258 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 PPBPP02775 128 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 HBBP68871 147 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 MST1LQ2TV78 715 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
EPHA3-201ENST00000336596 PRSS57Q6UWY2 283 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 C12orf57Q99622 126 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 CHCHD5Q9BSY4 110 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 V9GYH0 126 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 OTOGLQ3ZCN5 2332 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 ARL14EPLP0DKL9 152 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 LYPD1Q8N2G4 141 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 FER1L6-AS1Q8NA97 138 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 TRGV9Q99603 122 aa6.05□□□□□ -1.44
EPHA3-201ENST00000336596 KLF17Q5JT82 389 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 FAM201AQ5SY85 155 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 ST6GALNAC6Q969X2 333 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 ISOC2Q96AB3 205 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 PEX7O00628 323 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 CD8AP01732 235 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 GZMBP10144 247 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 HOXA5P20719 270 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 RPL29P47914 159 aaKnown RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 MEF2BQ02080 365 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 HEATR1Q9H583 2144 aaKnown RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 IGKV3OR2-268A0A0C4DH90 116 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 A0A1B0GWJ7 208 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 CIDEAO60543 219 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 SPNP16150 400 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 INSL3P51460 131 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 TCL1AP56279 114 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 C15orf32Q32M92 178 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 PHLDA1Q8WV24 401 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 LYNX1G3V0Z9 82 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 RPLP1P05386 114 aaKnown RBP6.04□□□□□ -1.44
EPHA3-201ENST00000336596 LYNX1P0DP58 116 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 SS18Q15532 418 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 C18orf12Q96KH6 178 aa6.04□□□□□ -1.44
EPHA3-201ENST00000336596 TRAV24A0A0B4J272 114 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 TMEM89A2RUT3 159 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 TOMM40O96008 361 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 OR2K2Q8NGT1 345 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 NPCDR1Q9BY65 106 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 Q9H3A6 140 aa6.03□□□□□ -1.44
EPHA3-201ENST00000336596 SPTBN1Q01082 2364 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms