RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 IGLV1-47P01700 117 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 PSG5Q15238 335 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
LIMK1-201ENST00000336180 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 LSM4Q9Y4Z0 139 aaKnown RBP10.09□□□□□ -0.79
LIMK1-201ENST00000336180 FAM90A9PA6NNJ1 464 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 CNIH1O95406 144 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 LIPFP07098 398 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 ORM2P19652 201 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 SLAQ13239 276 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 OR5I1Q13606 314 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 VMA21Q3ZAQ7 101 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 DOPEY1Q5JWR5 2465 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 LINC00869P0C866 280 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 PYYP10082 97 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 PRRX1P54821 245 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 RHEBQ15382 184 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 POU2AF1Q16633 256 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 GFI1BQ5VTD9 330 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 C16orf82Q7Z2V1 217 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 PDPNQ86YL7 162 aa10.09□□□□□ -0.79
LIMK1-201ENST00000336180 A1L4Q6 167 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 OR5G3P0C626 314 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 SDF2L1Q9HCN8 221 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
LIMK1-201ENST00000336180 M0QZ24 198 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 USF1P22415 310 aaPredicted RBP10.08□□□□□ -0.8
LIMK1-201ENST00000336180 ELOBQ15370 118 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 OR5B3Q8NH48 314 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 TMEM37Q8WXS4 190 aa10.08□□□□□ -0.8
LIMK1-201ENST00000336180 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
LIMK1-201ENST00000336180 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
LIMK1-201ENST00000336180 CD69Q07108 199 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 SSX8Q7RTT4 187 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 IL3RAP26951 378 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 GCHFRP30047 84 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
LIMK1-201ENST00000336180 FAM3BP58499 235 aaPredicted RBP10.07□□□□□ -0.8
LIMK1-201ENST00000336180 TMEM241Q24JQ0 296 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 VMO1Q7Z5L0 202 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 FBN2P35556 2912 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 FABP4P15090 132 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 PTTG1IPP53801 180 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 PRSS8Q16651 343 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 SLC45A2Q9UMX9 530 aa10.07□□□□□ -0.8
LIMK1-201ENST00000336180 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
LIMK1-201ENST00000336180 TRBV20OR9-2A0A075B6H5 130 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 TRGC2P03986 189 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 RAB31Q13636 194 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 NOL4LQ96MY1 436 aaPredicted RBP10.06□□□□□ -0.8
LIMK1-201ENST00000336180 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 IGLC7A0M8Q6 106 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 PF4V1P10720 104 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 HTR1DP28221 377 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 BATFQ16520 125 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 TXN2Q99757 166 aa10.06□□□□□ -0.8
LIMK1-201ENST00000336180 XKRY2A2RUG3 117 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 STAG3L2P0CL84 134 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 LINC00311Q8N616 119 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 OR1B1Q8NGR6 318 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 OR4X1Q8NH49 305 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 ASCL2Q99929 193 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PRR20EP86478 221 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PRR20CP86479 221 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PRR20DP86480 221 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PRR20BP86481 221 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 PRR20AP86496 221 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 FAM120AOSQ5T036 256 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 TMEM144Q7Z5S9 345 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 ZNF503Q96F45 646 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 SPINK4O60575 86 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 CRYBB3P26998 211 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 TFPI2P48307 235 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 RHOBP62745 196 aa10.05□□□□□ -0.8
LIMK1-201ENST00000336180 BBC3Q96PG8 261 aaPredicted RBP10.05□□□□□ -0.8
LIMK1-201ENST00000336180 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
LIMK1-201ENST00000336180 VENTXO95231 258 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 MC5RP33032 325 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms