RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PDLIM4P50479 330 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.97□□□□□ -0.33
HDAC5-202ENST00000336057 GFRA3O60609 400 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 LINC00205P59089 165 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 RSPO1Q2MKA7 263 aaPredicted RBP12.97□□□□□ -0.33
HDAC5-202ENST00000336057 PYY3Q5JQD4 70 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 ST6GALNAC6Q969X2 333 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
HDAC5-202ENST00000336057 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 PLXNB3Q9ULL4 1909 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 NTF4P34130 210 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 C10orf55Q5SWW7 151 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 MYO7BQ6PIF6 2116 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 CA1P00915 261 aaPredicted RBP12.97□□□□□ -0.33
HDAC5-202ENST00000336057 TRGV3P03979 118 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 ORMDL3Q8N138 153 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
HDAC5-202ENST00000336057 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 LY6G6EA0A0G2JKS1 128 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 H3BVH4 76 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 TNFRSF14Q92956 283 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 U3KQA8 63 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 INTS1Q8N201 2190 aaKnown RBP12.96□□□□□ -0.33
HDAC5-202ENST00000336057 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
HDAC5-202ENST00000336057 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 ATP5J2P56134 94 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 PLP1P60201 277 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.34
HDAC5-202ENST00000336057 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 ERASQ7Z444 233 aa12.96□□□□□ -0.34
HDAC5-202ENST00000336057 IGHG3P01860 377 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 NBASA2RRP1 2371 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 LYNX1G3V0Z9 82 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM50AO95807 157 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 LYNX1P0DP58 116 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 AREGP15514 252 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
HDAC5-202ENST00000336057 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
HDAC5-202ENST00000336057 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 RNFT1Q5M7Z0 435 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 C8orf46Q8TAG6 207 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM200BQ69YZ2 307 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 NUDT10Q8NFP7 164 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 NUDT11Q96G61 164 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 SNAI2O43623 268 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM160Q9NX00 188 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
HDAC5-202ENST00000336057 C10orf91Q5T1B1 145 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 LY96Q9Y6Y9 160 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 WNK2Q9Y3S1 2297 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 KIR2DL4Q99706 377 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 NPIPB6E9PJ23 425 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 TIMM23O14925 209 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 IGLV3-1P01715 115 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 CD24P25063 80 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 PAX9P55771 341 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 CLEC19AQ6UXS0 136 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 DIDO1Q9BTC0 2240 aaKnown RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 MBD3L4A6NDZ8 208 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 MBD3L3A6NE82 208 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 MBD3L5A6NJ08 208 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 LINC00614P0C842 121 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 MYOD1P15172 320 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 PRSS8Q16651 343 aa12.93□□□□□ -0.34
HDAC5-202ENST00000336057 MBD3L2Q8NHZ7 208 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-202ENST00000336057 OR11H12B2RN74 326 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 M0R381 172 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 OR11H1Q8NG94 326 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 OR11H2Q8NH07 326 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 TSPOP30536 169 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM256Q8N2U0 113 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 ST6GALNAC3Q8NDV1 305 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 ATP5LO75964 103 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 GAFA1Q96PS6 74 aa12.92□□□□□ -0.34
HDAC5-202ENST00000336057 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 IGHV1-8P0DP01 117 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
HDAC5-202ENST00000336057 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 CYB5R2Q6BCY4 276 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 VKORC1Q9BQB6 163 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 IGHV2-26A0A0B4J1V2 119 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 LMO1P25800 156 aa12.91□□□□□ -0.34
HDAC5-202ENST00000336057 H0YJW9 148 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 TNFSF13O75888 250 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 SMIM13P0DJ93 91 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms